Factsheet for PGSC0003DMT400074812

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
mitochondrion 1
peroxisome 1
golgi 2
extracellular 1
plasma membrane 3
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, nucleus, peroxisome, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	peroxisome
Plant-mPloc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g066980.2.1	Tomato	extracellular	53.77	98.28
GSMUA_Achr4P09910_001	Banana	plasma membrane	77.36	52.9
KRH61757	Soybean	plasma membrane	60.38	52.67
VIT_04s0008g05570.t01	Wine grape	plasma membrane, plastid	82.08	51.18
KRH05178	Soybean	plastid	79.72	48.99
KRH52423	Soybean	peroxisome	79.72	48.7
KRH15879	Soybean	plasma membrane, plastid	79.25	48.7
Bra040073.1-P	Field mustard	peroxisome	78.3	48.26
GSMUA_Achr6P36410_001	Banana	cytosol, extracellular, mitochondrion, plasma membrane	45.28	48.24
HORVU6Hr1G056950.2	Barley	plasma membrane	75.0	46.76
TraesCS6B01G251900.2	Wheat	plasma membrane	75.0	46.76
Bra023959.1-P	Field mustard	peroxisome	75.47	46.65
TraesCS6D01G205100.1	Wheat	plasma membrane	74.53	46.47
TraesCS6A01G229900.2	Wheat	plasma membrane	74.53	46.47
EES05418	Sorghum	cytosol, peroxisome, plasma membrane	75.94	46.13
Zm00001d051081_P002	Maize	cytosol, peroxisome, plasma membrane	75.0	45.69
Os02t0614100-01	Rice	plasma membrane	73.58	45.09
PGSC0003DMT400079415	Potato	cytosol, peroxisome, plasma membrane	66.51	42.09
Zm00001d017205_P001	Maize	cytosol, endoplasmic reticulum, peroxisome	75.0	36.98
GSMUA_Achr6P36420_001	Banana	cytosol, peroxisome, plasma membrane	22.64	24.49
Solyc08g066970.2.1	Tomato	plastid	20.28	22.75
PGSC0003DMT400075533	Potato	endoplasmic reticulum, plasma membrane, vacuole	30.66	20.31

Protein Annotations

EnsemblPlants:PGSC0003DMT400074812	EnsemblPlantsGene:PGSC0003DMG400029089	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:Sugar_P_trans_dom
PANTHER:PTHR44680	PANTHER:PTHR44680:SF2	PFAM:PF03151	PGSC:PGSC0003DMG400029089	TMHMM:TMhelix	UniParc:UPI0002969D00
UniProt:M1CU76	MapMan:24.2.1.1.8	:	:	:	:

Description

Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400029089]

Coordinates

chr8:+:39964650..39972290

Molecular Weight (calculated)

23276.0 Da

IEP (calculated)

8.851

GRAVY (calculated)

0.919

Length

212 amino acids

Sequence
(BLAST)

001: MESVRGVNVP MYTTLRRTTV VFTMIVESIL AGQKYSRPII GSVVIIVFGA FVAGARDLSF DFYSYAIVFL SNITTAIYLA TIARIGKSSG LNSFGLMWCN
101: GIVCGPFLLV WSLIRGDLAL TVDFPYLFSP GFLVVMLMSC ILAFFLNYSI FLNTTLNSAV TQTICGNLKD LFTISLGWFI FGGLPFDLLN VLGQLLGFVG
201: SGLYAYYKLM GK

Best Arabidopsis Sequence Match ( AT4G32272.1 )
(BLAST)

001: MRNNPVLPVS DPPLAGENDS DGKGVDDRLF KGSAMTKRGA YAALSYMACA VMLVLFNKAA LSSYDFPCVN VITLFQMVSS SLFLYALRRR KIISFTAADS
101: FSIDSASTFV PVKTLFHTLP LAIAYLLYML ASMASVRGVN VPMYTTLRRT TVAFTMVIEY MLTGQRYTRS IIGSVGIILL GAFFAGARDL SFDFYGYGVV
201: FLANISTAVY LATIARTGKS SGLNSFGLMW SNGIICGPIL MIWTFICGDL EKTINFPHLL TPGFMVVLLC SCVLAFVLNY CIFLNTTLNS ALTQTICGNM
301: KDLFTVGLGW MLFGGLPFDL MNVIGQLFGF FGSGLYAYYK IIGR

Arabidopsis Description

Nucleotide/sugar transporter family protein [Source:UniProtKB/TrEMBL;Acc:F4JU87]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.