Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 2
- extracellular 6
- golgi 4
- plasma membrane 5
- endoplasmic reticulum 4
- vacuole 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH56166 | Soybean | endoplasmic reticulum | 69.47 | 70.59 |
| KRH25351 | Soybean | endoplasmic reticulum | 68.95 | 69.31 |
| Bra005603.1-P | Field mustard | extracellular | 58.95 | 61.2 |
| CDY12195 | Canola | extracellular | 58.95 | 61.2 |
| CDY61410 | Canola | extracellular | 58.95 | 61.2 |
| VIT_12s0059g01040.t01 | Wine grape | extracellular, plasma membrane | 63.16 | 60.3 |
| CDY18288 | Canola | extracellular | 46.84 | 59.33 |
| AT1G05070.1 | Thale cress | extracellular | 57.37 | 59.24 |
| Solyc07g049730.2.1 | Tomato | nucleus | 61.05 | 58.88 |
| AT2G32580.1 | Thale cress | extracellular | 55.79 | 57.92 |
| PGSC0003DMT400002793 | Potato | extracellular, mitochondrion, plasma membrane, plastid | 60.0 | 57.87 |
| Bra015386.1-P | Field mustard | endoplasmic reticulum, extracellular | 44.74 | 56.67 |
| KRH36493 | Soybean | cytosol, mitochondrion, nucleus | 29.47 | 55.45 |
| CDY53389 | Canola | extracellular | 43.68 | 55.33 |
| GSMUA_Achr5P24760_001 | Banana | golgi | 53.16 | 53.44 |
| TraesCS5B01G416100.1 | Wheat | cytosol, mitochondrion, nucleus | 32.11 | 52.59 |
| TraesCS5D01G421600.1 | Wheat | cytosol, mitochondrion, nucleus | 30.53 | 52.25 |
| TraesCS5A01G412400.1 | Wheat | cytosol, mitochondrion, nucleus | 31.05 | 50.86 |
| KRH11478 | Soybean | golgi | 47.37 | 49.72 |
| EER90798 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 43.16 | 45.81 |
| TraesCS5A01G412700.1 | Wheat | endoplasmic reticulum, plasma membrane | 42.63 | 45.51 |
| Zm00001d034279_P001 | Maize | extracellular | 42.63 | 45.0 |
| TraesCS5A01G412800.1 | Wheat | extracellular, plasma membrane | 42.11 | 44.94 |
| TraesCS5D01G421400.1 | Wheat | endoplasmic reticulum, plasma membrane | 42.11 | 44.94 |
| Os03t0777500-01 | Rice | endoplasmic reticulum, plasma membrane | 43.16 | 44.81 |
| TraesCS5B01G416000.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 43.16 | 44.32 |
| TraesCS5A01G412200.1 | Wheat | plastid | 42.63 | 43.78 |
| HORVU5Hr1G099550.1 | Barley | endoplasmic reticulum, plasma membrane | 42.11 | 43.72 |
| TraesCS5B01G416300.1 | Wheat | endoplasmic reticulum, plasma membrane | 41.05 | 43.58 |
| GSMUA_Achr6P04630_001 | Banana | plastid | 54.74 | 40.0 |
| KRG96872 | Soybean | mitochondrion, plastid | 35.26 | 37.64 |
| KRH68600 | Soybean | mitochondrion, plastid | 34.74 | 37.29 |
| KRH12934 | Soybean | endoplasmic reticulum | 34.74 | 37.08 |
| KRH37920 | Soybean | endoplasmic reticulum | 34.21 | 36.72 |
| HORVU5Hr1G099640.1 | Barley | extracellular, mitochondrion, plasma membrane, plastid | 42.11 | 36.7 |
Protein Annotations
| EMBL:ACUP02008423 | EnsemblPlants:KRH22588 | EnsemblPlantsGene:GLYMA_13G310400 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:DUF1068 | ncoils:Coil | PANTHER:PTHR32254 | PANTHER:PTHR32254:SF11 | PFAM:PF06364 | ProteinID:KRH22588 |
| ProteinID:KRH22588.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI00023CF5C1 | UniProt:I1M459 | MapMan:35.2 |
Description
hypothetical protein
Coordinates
chr13:+:40590488..40592741
Molecular Weight (calculated)
20767.9 Da
IEP (calculated)
6.492
GRAVY (calculated)
-0.296
Length
190 amino acids
Sequence
(BLAST)
(BLAST)
001: MGMNCGGVVV RFGLWVVAMC IAGYIVAPPL YWHLIELLNH SSVSSSSSSC APCVCDCSSQ PIITIPQGLS NSSFEECAKH NPKVDGDTEN NVAELLSEEL
101: TLRETEALKN QHRADMALLE SKKIASQYQK EADKCNSGME TCEEAREKAE MALVAQKKLT ALWELRACQK GWNEGLAKSK KQSKGKVQTA
101: TLRETEALKN QHRADMALLE SKKIASQYQK EADKCNSGME TCEEAREKAE MALVAQKKLT ALWELRACQK GWNEGLAKSK KQSKGKVQTA
001: MARHTAALKI GLALLGLSMA GYILGPPLYW HLTEALAAVS ASSCPSCPCE CSTYSAVTIP KELSNASFAD CAKHDPEVNE DTEKNYAELL TEELKLREAE
101: SLEKHKRADM GLLEAKKVTS SYQKEADKCN SGMETCEEAR EKAELALAEQ KKLTSRWEER ARQKGWREGS TKPNVKSKSN VQVA
101: SLEKHKRADM GLLEAKKVTS SYQKEADKCN SGMETCEEAR EKAELALAEQ KKLTSRWEER ARQKGWREGS TKPNVKSKSN VQVA
Arabidopsis Description
At1g05070/T7A14_6 [Source:UniProtKB/TrEMBL;Acc:Q94AB8]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.