Factsheet for Bra005603.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra002403.1-P
Bra006619.1-P
Bra020182.1-P
Bra026434.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G32580.1	Bra026434.1-P	AT4G26455.1	21798944
AT2G32580.1	Bra002403.1-P	AT5G22290.1	21798944
AT2G32580.1	Bra006619.1-P	AT5G22290.1	21798944
AT2G32580.1	Bra020182.1-P	AT5G22290.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY61410	Canola	extracellular	100.0	100.0
CDY12195	Canola	extracellular	99.45	99.45
AT2G32580.1	Thale cress	extracellular	89.62	89.62
Bra015386.1-P	Field mustard	endoplasmic reticulum, extracellular	63.39	77.33
VIT_12s0059g01040.t01	Wine grape	extracellular, plasma membrane	69.4	63.82
KRH56166	Soybean	endoplasmic reticulum	63.93	62.57
KRH25351	Soybean	endoplasmic reticulum	63.39	61.38
KRH22588	Soybean	extracellular	61.2	58.95
Solyc07g049730.2.1	Tomato	nucleus	61.75	57.36
PGSC0003DMT400002793	Potato	extracellular, mitochondrion, plasma membrane, plastid	61.75	57.36
TraesCS5B01G416100.1	Wheat	cytosol, mitochondrion, nucleus	34.43	54.31
TraesCS5A01G412400.1	Wheat	cytosol, mitochondrion, nucleus	33.88	53.45
TraesCS5D01G421600.1	Wheat	cytosol, mitochondrion, nucleus	32.24	53.15
GSMUA_Achr5P24760_001	Banana	golgi	54.64	52.91
Bra000792.1-P	Field mustard	extracellular	50.27	52.57
TraesCS5D01G421400.1	Wheat	endoplasmic reticulum, plasma membrane	49.73	51.12
EER90798	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	49.73	50.84
TraesCS5B01G416000.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	50.82	50.27
TraesCS5A01G412700.1	Wheat	endoplasmic reticulum, plasma membrane	48.63	50.0
TraesCS5A01G412800.1	Wheat	extracellular, plasma membrane	48.09	49.44
TraesCS5A01G412200.1	Wheat	plastid	49.73	49.19
HORVU5Hr1G099550.1	Barley	endoplasmic reticulum, plasma membrane	49.18	49.18
TraesCS5B01G416300.1	Wheat	endoplasmic reticulum, plasma membrane	48.09	49.16
Os03t0777500-01	Rice	endoplasmic reticulum, plasma membrane	48.63	48.63
Zm00001d034279_P001	Maize	extracellular	47.54	48.33
Bra011240.1-P	Field mustard	extracellular, golgi	39.34	41.62
Bra010260.1-P	Field mustard	extracellular, golgi	38.8	41.28
GSMUA_Achr6P04630_001	Banana	plastid	55.74	39.23
HORVU5Hr1G099640.1	Barley	extracellular, mitochondrion, plasma membrane, plastid	45.36	38.07

Protein Annotations

EnsemblPlants:Bra005603.1	EnsemblPlants:Bra005603.1-P	EnsemblPlantsGene:Bra005603	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005768	GO:GO:0005794	GO:GO:0005802	InterPro:DUF1068	ncoils:Coil
PANTHER:PTHR32254	PANTHER:PTHR32254:SF11	PFAM:PF06364	SEG:seg	TMHMM:TMhelix	UniParc:UPI00025477C8
UniProt:M4CN15	MapMan:35.2	:	:	:	:

Description

AT2G32580 (E=9e-067) | unknown protein

Coordinates

chrA05:+:6488047..6489125

Molecular Weight (calculated)

19984.9 Da

IEP (calculated)

7.750

GRAVY (calculated)

-0.497

Length

183 amino acids

Sequence
(BLAST)

001: MAKHTAALKA GLTLLALSMI GYILGPPLYW HLTEALVASA SSCSPCVCDC SSLPLLTIPK GLSNGSFGDC AKHDPEVNED TEKNYAELLT EELKQREAAS
101: MEKHKRVDTG LLEAKKITSS YQKEADKCNS GMETCEEARE KSEKALVEQK KLTSMWELRA RQKGWKEGAT KSSVKSKSSV QAS

Best Arabidopsis Sequence Match ( AT2G32580.1 )
(BLAST)

001: MAKHTAALKV GLALLALSMI GYILGPPLYW HLTEALAVSA TSCSACVCDC SSLPLLTIPT GLSNGSFTDC AKRDPEVNED TEKNYAELLT EELKQREAAS
101: MEKHKRVDTG LLEAKKITSS YQKEADKCNS GMETCEEARE KAEKALVEQK KLTSMWEQRA RQKGYKDGAT KSTVKSKSGT EVA

Arabidopsis Description

Expressed protein [Source:UniProtKB/TrEMBL;Acc:O80895]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.