Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
extracellular:
20408568
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d003334_P001 | |
| Zm00001d005997_P002 | |
| Zm00001d020879_P001 | |
| Zm00001d025667_P001 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER90798 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 94.44 | 94.97 |
| Os03t0777500-01 | Rice | endoplasmic reticulum, plasma membrane | 80.0 | 78.69 |
| HORVU5Hr1G099550.1 | Barley | endoplasmic reticulum, plasma membrane | 75.0 | 73.77 |
| TraesCS5A01G412200.1 | Wheat | plastid | 75.56 | 73.51 |
| TraesCS5D01G421400.1 | Wheat | endoplasmic reticulum, plasma membrane | 71.67 | 72.47 |
| TraesCS5A01G412400.1 | Wheat | cytosol, mitochondrion, nucleus | 46.67 | 72.41 |
| TraesCS5B01G416100.1 | Wheat | cytosol, mitochondrion, nucleus | 46.67 | 72.41 |
| TraesCS5B01G416000.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 73.89 | 71.89 |
| TraesCS5D01G421600.1 | Wheat | cytosol, mitochondrion, nucleus | 43.89 | 71.17 |
| TraesCS5A01G412700.1 | Wheat | endoplasmic reticulum, plasma membrane | 70.0 | 70.79 |
| TraesCS5A01G412800.1 | Wheat | extracellular, plasma membrane | 69.44 | 70.22 |
| TraesCS5B01G416300.1 | Wheat | endoplasmic reticulum, plasma membrane | 69.44 | 69.83 |
| KRH36493 | Soybean | cytosol, mitochondrion, nucleus | 31.67 | 56.44 |
| HORVU5Hr1G099640.1 | Barley | extracellular, mitochondrion, plasma membrane, plastid | 68.33 | 56.42 |
| Solyc02g080960.1.1 | Tomato | cytosol, mitochondrion, nucleus | 23.33 | 56.0 |
| GSMUA_Achr5P24760_001 | Banana | golgi | 53.89 | 51.32 |
| CDY53389 | Canola | extracellular | 40.0 | 48.0 |
| CDY61410 | Canola | extracellular | 48.33 | 47.54 |
| CDY12195 | Canola | extracellular | 48.33 | 47.54 |
| Bra005603.1-P | Field mustard | extracellular | 48.33 | 47.54 |
| AT1G05070.1 | Thale cress | extracellular | 48.33 | 47.28 |
| AT2G32580.1 | Thale cress | extracellular | 47.22 | 46.45 |
| VIT_12s0059g01040.t01 | Wine grape | extracellular, plasma membrane | 51.11 | 46.23 |
| KRH25351 | Soybean | endoplasmic reticulum | 48.33 | 46.03 |
| Bra015386.1-P | Field mustard | endoplasmic reticulum, extracellular | 38.33 | 46.0 |
| KRH56166 | Soybean | endoplasmic reticulum | 47.78 | 45.99 |
| KRH11478 | Soybean | golgi | 46.11 | 45.86 |
| CDY18288 | Canola | extracellular | 37.78 | 45.33 |
| Solyc07g049730.2.1 | Tomato | nucleus | 48.89 | 44.67 |
| PGSC0003DMT400002793 | Potato | extracellular, mitochondrion, plasma membrane, plastid | 47.78 | 43.65 |
| KRH22588 | Soybean | extracellular | 45.0 | 42.63 |
| AT4G04360.1 | Thale cress | extracellular, golgi | 41.11 | 42.05 |
| CDX90862 | Canola | extracellular | 39.44 | 40.57 |
| Bra000792.1-P | Field mustard | extracellular | 39.44 | 40.57 |
| CDX94551 | Canola | extracellular, golgi, vacuole | 40.0 | 40.45 |
| CDY21300 | Canola | nucleus | 34.44 | 40.0 |
| GSMUA_Achr6P04630_001 | Banana | plastid | 57.22 | 39.62 |
| CDX90859 | Canola | extracellular | 37.78 | 38.86 |
| Zm00001d025794_P002 | Maize | golgi, plasma membrane, plastid | 36.11 | 34.39 |
Protein Annotations
| EMBL:EU965624 | EnsemblPlants:Zm00001d034279_P001 | EnsemblPlants:Zm00001d034279_T001 | EnsemblPlantsGene:Zm00001d034279 | EntrezGene:100276901 | GO:GO:0005575 |
| GO:GO:0016020 | GO:GO:0016021 | InterPro:DUF1068 | ncoils:Coil | PANTHER:PTHR32254 | PANTHER:PTHR32254:SF11 |
| PFAM:PF06364 | ProteinID:ONM09918.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000182E065 | UniProt:B6TKV9 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr1:-:288410720..288412651
Molecular Weight (calculated)
19560.2 Da
IEP (calculated)
4.974
GRAVY (calculated)
-0.439
Length
180 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGGGAPSAW GPSPALVTAL VALLGLGLAA YIVGPQLYWH AAEVLTAAAA CPACDCNCDA RPLLDLPEDC AKHFKGVKSR ASGEETEKSF TELLVEELKQ
101: REEEATQAQQ EADVKLLEAK KLASQYQKEA DKCSSGMDTC EETRENSAEA LVQQKKLTSL WERRARELGW RPENAKARLK
101: REEEATQAQQ EADVKLLEAK KLASQYQKEA DKCSSGMDTC EETRENSAEA LVQQKKLTSL WERRARELGW RPENAKARLK
001: MAKHTAALKV GLALLALSMI GYILGPPLYW HLTEALAVSA TSCSACVCDC SSLPLLTIPT GLSNGSFTDC AKRDPEVNED TEKNYAELLT EELKQREAAS
101: MEKHKRVDTG LLEAKKITSS YQKEADKCNS GMETCEEARE KAEKALVEQK KLTSMWEQRA RQKGYKDGAT KSTVKSKSGT EVA
101: MEKHKRVDTG LLEAKKITSS YQKEADKCNS GMETCEEARE KAEKALVEQK KLTSMWEQRA RQKGYKDGAT KSTVKSKSGT EVA
Arabidopsis Description
Expressed protein [Source:UniProtKB/TrEMBL;Acc:O80895]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.