Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 7
- vacuole 4
- plasma membrane 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra015386.1-P | Field mustard | endoplasmic reticulum, extracellular | 67.93 | 83.33 |
| CDY53389 | Canola | extracellular | 67.39 | 82.67 |
| CDY18288 | Canola | extracellular | 67.39 | 82.67 |
| AT2G32580.1 | Thale cress | extracellular | 78.8 | 79.23 |
| VIT_12s0059g01040.t01 | Wine grape | extracellular, plasma membrane | 67.93 | 62.81 |
| KRH56166 | Soybean | endoplasmic reticulum | 59.24 | 58.29 |
| KRH22588 | Soybean | extracellular | 59.24 | 57.37 |
| KRH25351 | Soybean | endoplasmic reticulum | 58.7 | 57.14 |
| Solyc07g049730.2.1 | Tomato | nucleus | 60.87 | 56.85 |
| PGSC0003DMT400002793 | Potato | extracellular, mitochondrion, plasma membrane, plastid | 60.33 | 56.35 |
| TraesCS5B01G416100.1 | Wheat | cytosol, mitochondrion, nucleus | 34.78 | 55.17 |
| TraesCS5A01G412400.1 | Wheat | cytosol, mitochondrion, nucleus | 34.24 | 54.31 |
| TraesCS5D01G421600.1 | Wheat | cytosol, mitochondrion, nucleus | 32.07 | 53.15 |
| GSMUA_Achr5P24760_001 | Banana | golgi | 53.8 | 52.38 |
| AT4G04360.1 | Thale cress | extracellular, golgi | 50.0 | 52.27 |
| TraesCS5D01G421400.1 | Wheat | endoplasmic reticulum, plasma membrane | 48.37 | 50.0 |
| TraesCS5B01G416000.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 50.0 | 49.73 |
| EER90798 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 48.37 | 49.72 |
| TraesCS5A01G412700.1 | Wheat | endoplasmic reticulum, plasma membrane | 47.83 | 49.44 |
| TraesCS5A01G412800.1 | Wheat | extracellular, plasma membrane | 47.28 | 48.88 |
| TraesCS5A01G412200.1 | Wheat | plastid | 48.91 | 48.65 |
| Zm00001d034279_P001 | Maize | extracellular | 47.28 | 48.33 |
| Os03t0777500-01 | Rice | endoplasmic reticulum, plasma membrane | 47.83 | 48.09 |
| HORVU5Hr1G099550.1 | Barley | endoplasmic reticulum, plasma membrane | 47.83 | 48.09 |
| TraesCS5B01G416300.1 | Wheat | endoplasmic reticulum, plasma membrane | 46.74 | 48.04 |
| AT4G30996.1 | Thale cress | extracellular, golgi | 39.13 | 41.86 |
| AT2G24290.1 | Thale cress | extracellular, golgi | 39.13 | 41.62 |
| GSMUA_Achr6P04630_001 | Banana | plastid | 55.43 | 39.23 |
| HORVU5Hr1G099640.1 | Barley | extracellular, mitochondrion, plasma membrane, plastid | 45.11 | 38.07 |
Protein Annotations
| MapMan:35.2 | EntrezGene:839330 | ProteinID:AEE27787.1 | ArrayExpress:AT1G05070 | EnsemblPlantsGene:AT1G05070 | RefSeq:AT1G05070 |
| TAIR:AT1G05070 | RefSeq:AT1G05070-TAIR-G | EnsemblPlants:AT1G05070.1 | TAIR:AT1G05070.1 | EMBL:AY048292 | EMBL:AY085193 |
| EMBL:AY139793 | ncoils:Coil | InterPro:DUF1068 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005768 | GO:GO:0005794 | GO:GO:0005802 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | RefSeq:NP_563728.1 | PFAM:PF06364 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR32254 | PANTHER:PTHR32254:SF11 | UniProt:Q94AB8 |
| TMHMM:TMhelix | UniParc:UPI00000AB756 | SEG:seg | : | : | : |
Description
At1g05070/T7A14_6 [Source:UniProtKB/TrEMBL;Acc:Q94AB8]
Coordinates
chr1:-:1457007..1458802
Molecular Weight (calculated)
20265.0 Da
IEP (calculated)
6.509
GRAVY (calculated)
-0.577
Length
184 amino acids
Sequence
(BLAST)
(BLAST)
001: MARHTAALKI GLALLGLSMA GYILGPPLYW HLTEALAAVS ASSCPSCPCE CSTYSAVTIP KELSNASFAD CAKHDPEVNE DTEKNYAELL TEELKLREAE
101: SLEKHKRADM GLLEAKKVTS SYQKEADKCN SGMETCEEAR EKAELALAEQ KKLTSRWEER ARQKGWREGS TKPNVKSKSN VQVA
101: SLEKHKRADM GLLEAKKVTS SYQKEADKCN SGMETCEEAR EKAELALAEQ KKLTSRWEER ARQKGWREGS TKPNVKSKSN VQVA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.