Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G05070.1 | CDX78905 | AT4G19030.1 | 21798944 |
| AT1G05070.1 | CDX98596 | AT4G19030.1 | 21798944 |
| AT1G05070.1 | CDX99411 | AT4G19030.1 | 21798944 |
| AT1G05070.1 | CDY01565 | AT4G19030.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY18288 | Canola | extracellular | 90.0 | 90.0 |
| AT1G05070.1 | Thale cress | extracellular | 82.67 | 67.39 |
| CDY12195 | Canola | extracellular | 78.0 | 63.93 |
| CDY61410 | Canola | extracellular | 78.0 | 63.93 |
| TraesCS5B01G416100.1 | Wheat | cytosol, mitochondrion, nucleus | 40.67 | 52.59 |
| TraesCS5D01G421600.1 | Wheat | cytosol, mitochondrion, nucleus | 38.0 | 51.35 |
| TraesCS5A01G412400.1 | Wheat | cytosol, mitochondrion, nucleus | 39.33 | 50.86 |
| VIT_12s0059g01040.t01 | Wine grape | extracellular, plasma membrane | 66.67 | 50.25 |
| KRH56166 | Soybean | endoplasmic reticulum | 61.33 | 49.2 |
| KRH25351 | Soybean | endoplasmic reticulum | 59.33 | 47.09 |
| Solyc07g049730.2.1 | Tomato | nucleus | 58.67 | 44.67 |
| PGSC0003DMT400002793 | Potato | extracellular, mitochondrion, plasma membrane, plastid | 58.67 | 44.67 |
| KRH22588 | Soybean | extracellular | 55.33 | 43.68 |
| CDY21300 | Canola | nucleus | 44.67 | 43.23 |
| CDY13405 | Canola | cytosol | 34.0 | 41.8 |
| GSMUA_Achr5P24760_001 | Banana | golgi | 52.67 | 41.8 |
| CDX90862 | Canola | extracellular | 48.0 | 41.14 |
| CDX90859 | Canola | extracellular | 47.33 | 40.57 |
| EER90798 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 48.0 | 40.22 |
| Zm00001d034279_P001 | Maize | extracellular | 48.0 | 40.0 |
| TraesCS5B01G416000.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 49.33 | 40.0 |
| TraesCS5D01G421400.1 | Wheat | endoplasmic reticulum, plasma membrane | 47.33 | 39.89 |
| TraesCS5A01G412200.1 | Wheat | plastid | 48.0 | 38.92 |
| Os03t0777500-01 | Rice | endoplasmic reticulum, plasma membrane | 47.33 | 38.8 |
| TraesCS5A01G412700.1 | Wheat | endoplasmic reticulum, plasma membrane | 46.0 | 38.76 |
| HORVU5Hr1G099550.1 | Barley | endoplasmic reticulum, plasma membrane | 46.67 | 38.25 |
| CDX94551 | Canola | extracellular, golgi, vacuole | 45.33 | 38.2 |
| TraesCS5A01G412800.1 | Wheat | extracellular, plasma membrane | 45.33 | 38.2 |
| TraesCS5B01G416300.1 | Wheat | endoplasmic reticulum, plasma membrane | 45.33 | 37.99 |
| CDX68715 | Canola | extracellular, golgi | 39.33 | 34.3 |
| CDY23272 | Canola | extracellular, golgi | 39.33 | 34.3 |
| CDY28236 | Canola | extracellular, golgi | 39.33 | 34.1 |
| CDX72284 | Canola | extracellular, golgi | 39.33 | 34.1 |
| CDY51486 | Canola | extracellular, golgi | 38.67 | 33.72 |
| GSMUA_Achr6P04630_001 | Banana | plastid | 52.0 | 30.0 |
| HORVU5Hr1G099640.1 | Barley | extracellular, mitochondrion, plasma membrane, plastid | 43.33 | 29.82 |
Protein Annotations
| EnsemblPlants:CDY53389 | EnsemblPlantsGene:GSBRNA2T00010610001 | InterPro:DUF1068 | ncoils:Coil | PANTHER:PTHR32254 | PANTHER:PTHR32254:SF11 |
| PFAM:PF06364 | ProteinID:CDY53389 | ProteinID:CDY53389.1 | SEG:seg | SignalP:SignalP-noTM | UniParc:UPI0004EE7C02 |
| UniProt:A0A078IVD4 | MapMan:35.2 | : | : | : | : |
Description
BnaAnng12370DBnaAnng12370D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IVD4]
Coordinates
chrLK033196:+:16807..18093
Molecular Weight (calculated)
16499.5 Da
IEP (calculated)
6.280
GRAVY (calculated)
-0.687
Length
150 amino acids
Sequence
(BLAST)
(BLAST)
001: MASHAAALKV GLALLGLSMP LLTISEGLSN ASFVDCAKHD PEVNEDTEKN YTELLTEEMK LREAASLEKH KRADMGLLEA KKVTSSYQKE ADKCNSGMET
101: CEEVREKAEL ALAEQKKLTS KWEERARQKG WRDGATKSNI KTNSNAQAAA
101: CEEVREKAEL ALAEQKKLTS KWEERARQKG WRDGATKSNI KTNSNAQAAA
001: MARHTAALKI GLALLGLSMA GYILGPPLYW HLTEALAAVS ASSCPSCPCE CSTYSAVTIP KELSNASFAD CAKHDPEVNE DTEKNYAELL TEELKLREAE
101: SLEKHKRADM GLLEAKKVTS SYQKEADKCN SGMETCEEAR EKAELALAEQ KKLTSRWEER ARQKGWREGS TKPNVKSKSN VQVA
101: SLEKHKRADM GLLEAKKVTS SYQKEADKCN SGMETCEEAR EKAELALAEQ KKLTSRWEER ARQKGWREGS TKPNVKSKSN VQVA
Arabidopsis Description
At1g05070/T7A14_6 [Source:UniProtKB/TrEMBL;Acc:Q94AB8]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.