Factsheet for HORVU5Hr1G099640.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane, plastid, extracellular

Predictor Summary:

plastid 2
extracellular 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU2Hr1G081800.3
HORVU5Hr1G071910.1
HORVU7Hr1G048940.3
HORVU7Hr1G088900.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G05070.1	HORVU7Hr1G088900.1	AT4G19030.1	21798944
AT2G32580.1	HORVU2Hr1G081800.3	AT4G26455.1	21798944
AT2G32580.1	HORVU5Hr1G071910.1	AT4G26455.1	21798944
AT2G32580.1	HORVU7Hr1G048940.3	AT4G26455.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G412700.1	Wheat	endoplasmic reticulum, plasma membrane	72.02	88.2
TraesCS5B01G416300.1	Wheat	endoplasmic reticulum, plasma membrane	71.56	87.15
HORVU5Hr1G099550.1	Barley	endoplasmic reticulum, plasma membrane	68.81	81.97
Os03t0777500-01	Rice	endoplasmic reticulum, plasma membrane	62.84	74.86
EER90798	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	58.72	71.51
Zm00001d034279_P001	Maize	extracellular	56.42	68.33
Solyc02g080960.1.1	Tomato	cytosol, mitochondrion, nucleus	19.72	57.33
KRH36493	Soybean	cytosol, mitochondrion, nucleus	24.77	53.47
GSMUA_Achr5P24760_001	Banana	golgi	44.5	51.32
CDY12195	Canola	extracellular	38.53	45.9
KRH25351	Soybean	endoplasmic reticulum	39.45	45.5
Bra005603.1-P	Field mustard	extracellular	38.07	45.36
CDY61410	Canola	extracellular	38.07	45.36
AT1G05070.1	Thale cress	extracellular	38.07	45.11
KRH56166	Soybean	endoplasmic reticulum	38.53	44.92
AT2G32580.1	Thale cress	extracellular	37.61	44.81
KRH11478	Soybean	golgi	37.16	44.75
CDY53389	Canola	extracellular	29.82	43.33
VIT_12s0059g01040.t01	Wine grape	extracellular, plasma membrane	39.45	43.22
Solyc07g049730.2.1	Tomato	nucleus	38.53	42.64
PGSC0003DMT400002793	Potato	extracellular, mitochondrion, plasma membrane, plastid	38.07	42.13
KRH22588	Soybean	extracellular	36.7	42.11
CDY18288	Canola	extracellular	28.9	42.0
AT4G04360.1	Thale cress	extracellular, golgi	33.49	41.48
Bra015386.1-P	Field mustard	endoplasmic reticulum, extracellular	28.44	41.33
CDX90862	Canola	extracellular	33.03	41.14
Bra000792.1-P	Field mustard	extracellular	33.03	41.14
CDX94551	Canola	extracellular, golgi, vacuole	33.49	41.01
GSMUA_Achr6P04630_001	Banana	plastid	48.62	40.77
CDY21300	Canola	nucleus	28.9	40.65
CDX90859	Canola	extracellular	31.65	39.43
HORVU2Hr1G086810.2	Barley	cytosol	21.56	18.65

Protein Annotations

EnsemblPlants:HORVU5Hr1G099640.1	EnsemblPlantsGene:HORVU5Hr1G099640	GO:GO:0005575	GO:GO:0016020	InterPro:DUF1068	ncoils:Coil
PANTHER:PTHR32254	PANTHER:PTHR32254:SF11	PFAM:PF06364	SEG:seg	UniParc:UPI000B462E24	UniProt:A0A287SHG5
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chrchr5H:+:610550489..610553326

Molecular Weight (calculated)

23559.2 Da

IEP (calculated)

6.615

GRAVY (calculated)

-0.326

Length

218 amino acids

Sequence
(BLAST)

001: ALITFGLAPV RPHSLPLSLL HCRAGPPTRH LRLLSPHHQS SAEAMAGGSS SSWGLSPAAV TALVAMLGLG VAAYIVGPPL YWHVAEALGR SPGACPACAC
101: DCDAVPLLQL PEDCAKQFKQ VKSRASSEET ELLIEELKQR EEEATEAQQQ ADVKLLEAKK LASQYQKEAD KCSSGMDTCE EAREKSAESL LGQRKLTALW
201: EERAQGLGWK PMKPHRNE

Best Arabidopsis Sequence Match ( AT2G32580.1 )
(BLAST)

001: MAKHTAALKV GLALLALSMI GYILGPPLYW HLTEALAVSA TSCSACVCDC SSLPLLTIPT GLSNGSFTDC AKRDPEVNED TEKNYAELLT EELKQREAAS
101: MEKHKRVDTG LLEAKKITSS YQKEADKCNS GMETCEEARE KAEKALVEQK KLTSMWEQRA RQKGYKDGAT KSTVKSKSGT EVA

Arabidopsis Description

Expressed protein [Source:UniProtKB/TrEMBL;Acc:O80895]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.