Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 3
- cytosol 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G265600.1 | Wheat | nucleus | 92.88 | 92.21 |
| TraesCS5A01G257000.1 | Wheat | cytosol, golgi, nucleus, plastid | 91.61 | 92.11 |
| TraesCS5B01G256500.1 | Wheat | cytosol, golgi, nucleus, plastid | 89.6 | 89.93 |
| Os09t0481300-01 | Rice | nucleus | 57.85 | 60.15 |
| EER96942 | Sorghum | cytosol, golgi, nucleus, plastid | 59.49 | 60.15 |
| Zm00001d005997_P002 | Maize | plastid | 58.21 | 59.29 |
| Zm00001d020879_P001 | Maize | cytosol, golgi, nucleus, plastid | 42.15 | 57.61 |
| HORVU7Hr1G048940.3 | Barley | cytosol | 44.53 | 42.73 |
| GSMUA_Achr10P... | Banana | cytosol | 27.01 | 29.37 |
| GSMUA_Achr4P01630_001 | Banana | cytosol, golgi, nucleus | 31.75 | 29.24 |
| GSMUA_Achr3P04120_001 | Banana | nucleus | 30.11 | 27.78 |
| Bra039387.1-P | Field mustard | cytosol, golgi, nucleus, plastid | 18.61 | 25.5 |
| Solyc07g066170.2.1 | Tomato | nucleus | 15.33 | 25.07 |
| HORVU2Hr1G081800.3 | Barley | cytosol, nucleus | 20.99 | 24.89 |
| CDX89333 | Canola | nucleus | 22.45 | 24.85 |
| Bra026434.1-P | Field mustard | nucleus | 22.45 | 24.85 |
| CDY43354 | Canola | cytosol, golgi, nucleus | 17.88 | 24.56 |
| CDX94330 | Canola | nucleus | 21.53 | 24.03 |
| CDX75706 | Canola | cytosol, golgi, nucleus | 18.07 | 23.57 |
| CDY24192 | Canola | plastid | 12.96 | 23.43 |
| PGSC0003DMT400022426 | Potato | nucleus | 24.64 | 23.04 |
| VIT_19s0015g01790.t01 | Wine grape | nucleus | 25.73 | 22.96 |
| AT4G26455.1 | Thale cress | nucleus | 20.44 | 22.9 |
| KRH56393 | Soybean | cytosol | 24.09 | 22.49 |
| CDY17403 | Canola | nucleus | 11.13 | 22.1 |
| AT5G56210.1 | Thale cress | nucleus | 20.44 | 22.0 |
| Bra001502.1-P | Field mustard | nucleus, plastid | 17.7 | 21.95 |
| PGSC0003DMT400056956 | Potato | nucleus | 23.91 | 21.91 |
| Bra002835.1-P | Field mustard | cytosol, golgi, nucleus | 10.95 | 21.74 |
| KRH62532 | Soybean | endoplasmic reticulum | 23.18 | 21.71 |
| CDX82542 | Canola | plastid | 17.52 | 21.67 |
| CDY32806 | Canola | cytosol, golgi, nucleus | 10.77 | 21.15 |
| AT3G13360.2 | Thale cress | extracellular, plasma membrane, vacuole | 18.98 | 20.08 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G071910.1 | EnsemblPlantsGene:HORVU5Hr1G071910 | ncoils:Coil | PANTHER:PTHR34562 | SEG:seg | UniParc:UPI000296CEE0 |
| UniProt:M0YYL2 | MapMan:20.4.2.1.2 | : | : | : | : |
Description
No Description!
Coordinates
chrchr5H:+:534117537..534122888
Molecular Weight (calculated)
58476.7 Da
IEP (calculated)
4.878
GRAVY (calculated)
-0.550
Length
548 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSGANSVGS VGESPPPVSP PGRPVAKGRG LRRWRRIPRE HHDDEGGSPA GPVAAAAPAD AGAEVDLAQL HKRRLPVGAD APKGKQEVAA EEDSPVASVE
101: SSFVPPEAPP SPSPATTPAP APTSLDPDLG LLIASAGFSV GAGGADSDNS DDRTSKSSTA LPRHDFSLAG FGRERDRGRS RAPGAAAHAK NLRTARARGA
201: GARAVSVASS TVEPENSRSS VESDLRSTGA AHARKSSAGI SSNGVHKFLY TDGDHSEDEA PSEHLGSAAG SFYKENGSAV GRMAMGNGDL YAHGHGFHEG
301: SISKGENGGI HSGLDPYTDS MSLLQSAQEA LENELQMFVE IGKESSDNST DIYNENEWIS SPNCEYFSEE ISEKLKLLES KLEEASLLID EKDSRILELD
401: TLNQTQPREA ALYNSKLLSL QSEVDQLLME KMEAEIQCFI LKRASEAWQP QTEGQGTLHE AQKSLSEDHK QLEVKLRHTE NRARTLEEMV EKLESQCKEL
501: SNASEVLKLQ AGASRASLFC SVQLVLLCVA VWTFVARFLP TPPEFVPT
101: SSFVPPEAPP SPSPATTPAP APTSLDPDLG LLIASAGFSV GAGGADSDNS DDRTSKSSTA LPRHDFSLAG FGRERDRGRS RAPGAAAHAK NLRTARARGA
201: GARAVSVASS TVEPENSRSS VESDLRSTGA AHARKSSAGI SSNGVHKFLY TDGDHSEDEA PSEHLGSAAG SFYKENGSAV GRMAMGNGDL YAHGHGFHEG
301: SISKGENGGI HSGLDPYTDS MSLLQSAQEA LENELQMFVE IGKESSDNST DIYNENEWIS SPNCEYFSEE ISEKLKLLES KLEEASLLID EKDSRILELD
401: TLNQTQPREA ALYNSKLLSL QSEVDQLLME KMEAEIQCFI LKRASEAWQP QTEGQGTLHE AQKSLSEDHK QLEVKLRHTE NRARTLEEMV EKLESQCKEL
501: SNASEVLKLQ AGASRASLFC SVQLVLLCVA VWTFVARFLP TPPEFVPT
001: MDLESESSVL ESVEDNNGLI GDLDKELNSP VETSPLISKG FGLRKWKRRL RRDLVKDDTS VSMENSKALK RVLSGLVDPN AKQMHLPGPE VRQDSVGSVG
101: SVNSVVGFVM GGESYGNGLA FAAGVDSDNS EDRSSTMSHS WDKHRGKVSG GKSVISSGDS SQQRKSSVEK SNKLRGERIK IEKENSHSSM ESADSRSSNF
201: VFMQGASYSL SSREQGGRRM MDYDDENSDH DAHTSKRKDN VEEEEEETED YSQGDCVEES QIKSNGSSDN LDPLIVAVNS FQTLQEALQK ELQKFQELGK
301: EEPITSLHDG GESSSCIHAG HEGASEASSS YRFGSEKMGE MELTSLDSEI LNLVNNVEHL EIKLEEAKRI LEVKETQIRE LESTINVSET CNGGTEIGIE
401: DIFQQKVEAE IEYIIFSRSV GNLKRRIKLI EEEKTLGLSK LDKAETKAEN LKNQAQDLQN HCVEITEIQE VECLKKRAFK TTRCLLLQLG LLFILYYSLL
501: PEPEIAVPT
101: SVNSVVGFVM GGESYGNGLA FAAGVDSDNS EDRSSTMSHS WDKHRGKVSG GKSVISSGDS SQQRKSSVEK SNKLRGERIK IEKENSHSSM ESADSRSSNF
201: VFMQGASYSL SSREQGGRRM MDYDDENSDH DAHTSKRKDN VEEEEEETED YSQGDCVEES QIKSNGSSDN LDPLIVAVNS FQTLQEALQK ELQKFQELGK
301: EEPITSLHDG GESSSCIHAG HEGASEASSS YRFGSEKMGE MELTSLDSEI LNLVNNVEHL EIKLEEAKRI LEVKETQIRE LESTINVSET CNGGTEIGIE
401: DIFQQKVEAE IEYIIFSRSV GNLKRRIKLI EEEKTLGLSK LDKAETKAEN LKNQAQDLQN HCVEITEIQE VECLKKRAFK TTRCLLLQLG LLFILYYSLL
501: PEPEIAVPT
Arabidopsis Description
WIP2WPP domain-interacting protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FH18]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.