Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G375800.1 | Wheat | golgi | 50.4 | 67.55 |
| TraesCS2A01G356500.1 | Wheat | golgi | 50.4 | 67.55 |
| TraesCS2D01G355400.1 | Wheat | golgi | 50.4 | 66.84 |
| VIT_00s0912g00010.t01 | Wine grape | cytosol | 26.59 | 58.26 |
| CDY13405 | Canola | cytosol | 28.17 | 58.2 |
| Zm00001d025794_P002 | Maize | golgi, plasma membrane, plastid | 42.46 | 56.61 |
| Os04t0501800-00 | Rice | golgi, plasma membrane | 43.65 | 56.12 |
| EES11077 | Sorghum | mitochondrion, plastid | 42.86 | 55.38 |
| AT4G30996.1 | Thale cress | extracellular, golgi | 34.52 | 50.58 |
| CDY23272 | Canola | extracellular, golgi | 33.73 | 49.42 |
| CDX68715 | Canola | extracellular, golgi | 33.73 | 49.42 |
| Bra010260.1-P | Field mustard | extracellular, golgi | 33.73 | 49.42 |
| CDY28236 | Canola | extracellular, golgi | 33.73 | 49.13 |
| Bra011240.1-P | Field mustard | extracellular, golgi | 33.73 | 49.13 |
| VIT_11s0206g00100.t01 | Wine grape | extracellular, golgi | 33.73 | 49.13 |
| GSMUA_AchrUn_... | Banana | extracellular, golgi | 34.92 | 48.89 |
| CDY51486 | Canola | extracellular, golgi | 33.33 | 48.84 |
| AT2G24290.1 | Thale cress | extracellular, golgi | 33.33 | 48.55 |
| PGSC0003DMT400008268 | Potato | extracellular, golgi | 32.14 | 47.93 |
| Solyc07g005180.2.1 | Tomato | nucleus | 32.14 | 47.93 |
| CDX72284 | Canola | extracellular, golgi | 32.54 | 47.4 |
| KRH12934 | Soybean | endoplasmic reticulum | 31.35 | 44.38 |
| KRH37920 | Soybean | endoplasmic reticulum | 30.16 | 42.94 |
| HORVU5Hr1G099550.1 | Barley | endoplasmic reticulum, plasma membrane | 20.63 | 28.42 |
| HORVU5Hr1G099640.1 | Barley | extracellular, mitochondrion, plasma membrane, plastid | 18.65 | 21.56 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G086810.2 | EnsemblPlantsGene:HORVU2Hr1G086810 | InterPro:DUF1068 | ncoils:Coil | PANTHER:PTHR32254 | PANTHER:PTHR32254:SF4 |
| PFAM:PF06364 | SEG:seg | UniParc:UPI000B47B85A | UniProt:A0A287ISK9 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chrchr2H:-:624652897..624655477
Molecular Weight (calculated)
14975.6 Da
IEP (calculated)
5.066
GRAVY (calculated)
-0.382
Length
252 amino acids
Sequence
(BLAST)
(BLAST)
001: AXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
101: XXXXXXXXXX XXXXXXXXXX PCTCDCPPPL SLQSIAPGLM NFSISACGTD DPERIKEMEK QFVDLLNEEL KLQQVVAEEH IHHMNATLVE AKRQATLYQR
201: EAEKCNAATE TCEEAREKSE GAISKERKLT ALWERRARES GWQDSRATTT AR
101: XXXXXXXXXX XXXXXXXXXX PCTCDCPPPL SLQSIAPGLM NFSISACGTD DPERIKEMEK QFVDLLNEEL KLQQVVAEEH IHHMNATLVE AKRQATLYQR
201: EAEKCNAATE TCEEAREKSE GAISKERKLT ALWERRARES GWQDSRATTT AR
001: MARRSGNCMR CLVIFSVVSA LLVCGPALYW KLNKGFVGSA RSTNSICPPC VCDFPPPLSL LQIAPGLANL SITGCGSDDP ELKEEMEKPF VDLLTEELKL
101: QEAVADEHSR HMNVTLAEAK RVASQYQKEA EKCNAATEIC ESARERAQAL LLKERKITFL WERRARQLGW EGE
101: QEAVADEHSR HMNVTLAEAK RVASQYQKEA EKCNAATEIC ESARERAQAL LLKERKITFL WERRARQLGW EGE
Arabidopsis Description
Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q9ZQ38]
SUBAcon: [extracellular,golgi]
SUBAcon: [extracellular,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.