Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY13405 | Canola | cytosol | 71.3 | 67.21 |
| VIT_11s0206g00100.t01 | Wine grape | extracellular, golgi | 88.7 | 58.96 |
| CDX68715 | Canola | extracellular, golgi | 73.91 | 49.42 |
| Bra011240.1-P | Field mustard | extracellular, golgi | 73.91 | 49.13 |
| CDY28236 | Canola | extracellular, golgi | 73.91 | 49.13 |
| AT4G30996.1 | Thale cress | extracellular, golgi | 73.04 | 48.84 |
| Bra010260.1-P | Field mustard | extracellular, golgi | 73.04 | 48.84 |
| CDY23272 | Canola | extracellular, golgi | 73.04 | 48.84 |
| AT2G24290.1 | Thale cress | extracellular, golgi | 73.04 | 48.55 |
| CDY51486 | Canola | extracellular, golgi | 72.17 | 48.26 |
| CDX72284 | Canola | extracellular, golgi | 71.3 | 47.4 |
| Solyc07g005180.2.1 | Tomato | nucleus | 61.74 | 42.01 |
| KRH37920 | Soybean | endoplasmic reticulum | 64.35 | 41.81 |
| PGSC0003DMT400008268 | Potato | extracellular, golgi | 60.87 | 41.42 |
| KRH12934 | Soybean | endoplasmic reticulum | 63.48 | 41.01 |
| GSMUA_AchrUn_... | Banana | extracellular, golgi | 63.48 | 40.56 |
| TraesCS2B01G375800.1 | Wheat | golgi | 60.0 | 36.7 |
| Os04t0501800-00 | Rice | golgi, plasma membrane | 61.74 | 36.22 |
| TraesCS2A01G356500.1 | Wheat | golgi | 58.26 | 35.64 |
| Zm00001d025794_P002 | Maize | golgi, plasma membrane, plastid | 58.26 | 35.45 |
| TraesCS2D01G355400.1 | Wheat | golgi | 58.26 | 35.26 |
| EES11077 | Sorghum | mitochondrion, plastid | 59.13 | 34.87 |
| VIT_12s0059g01040.t01 | Wine grape | extracellular, plasma membrane | 46.09 | 26.63 |
| HORVU2Hr1G086810.2 | Barley | cytosol | 58.26 | 26.59 |
Protein Annotations
| ArrayExpress:VIT_00s0912g00010 | EMBL:FN595098 | EnsemblPlants:VIT_00s0912g00010.t01 | EnsemblPlantsGene:VIT_00s0912g00010 | EntrezGene:100854907 | InterPro:DUF1068 |
| PANTHER:PTHR32254 | PANTHER:PTHR32254:SF4 | PFAM:PF06364 | ProteinID:CBI18844 | ProteinID:CBI18844.3 | RefSeq:XP_010647410.1 |
| SEG:seg | SignalP:SignalP-noTM | UniParc:UPI0001BE16D1 | UniProt:D7ST48 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chrUn:-:36747492..36748136
Molecular Weight (calculated)
13274.9 Da
IEP (calculated)
5.313
GRAVY (calculated)
-0.625
Length
115 amino acids
Sequence
(BLAST)
(BLAST)
001: MMTFMHMILI FGDGTGCGGD DPDLRREMEK QFVDLLTEEL KLQEAVAAEH ARHMNITFLE AKRVASQYQR EAEKCNSATE TCEGARERAE ALLIKERKVT
101: SLWERRARRL GWEGE
101: SLWERRARRL GWEGE
001: MPRRSGDCMR CLVIFAVVSA LVVCGPALYW KFNKGFVGST RANSLCPPCV CDCPPPLSLL QIAPGLANLS ITDCGSDDPE LKQEMEKQFV DLLTEELKLQ
101: EAVADEHSRH MNVTLAEAKR VASQYQKEAE KCNAATEICE SARERAEALL IKERKITSLW EKRARQSGWE GE
101: EAVADEHSRH MNVTLAEAKR VASQYQKEAE KCNAATEICE SARERAEALL IKERKITSLW EKRARQSGWE GE
Arabidopsis Description
NKS1 [Source:UniProtKB/TrEMBL;Acc:A0A178UW02]
SUBAcon: [golgi,extracellular]
SUBAcon: [golgi,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.