CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

nucleus 2
plastid 2
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 3
golgi 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plastid
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	nucleus
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d025794_P002	Maize	golgi, plasma membrane, plastid	91.79	94.71
Os04t0501800-00	Rice	golgi, plasma membrane	84.1	83.67
TraesCS2B01G375800.1	Wheat	golgi	76.92	79.79
TraesCS2A01G356500.1	Wheat	golgi	76.92	79.79
TraesCS2D01G355400.1	Wheat	golgi	76.92	78.95
GSMUA_AchrUn_...	Banana	extracellular, golgi	61.54	66.67
AT4G30996.1	Thale cress	extracellular, golgi	56.41	63.95
CDX68715	Canola	extracellular, golgi	56.41	63.95
CDY28236	Canola	extracellular, golgi	56.41	63.58
CDY13405	Canola	cytosol	39.49	63.11
Bra010260.1-P	Field mustard	extracellular, golgi	55.38	62.79
Bra011240.1-P	Field mustard	extracellular, golgi	55.38	62.43
CDY23272	Canola	extracellular, golgi	54.87	62.21
CDY51486	Canola	extracellular, golgi	54.36	61.63
AT2G24290.1	Thale cress	extracellular, golgi	54.36	61.27
VIT_11s0206g00100.t01	Wine grape	extracellular, golgi	54.36	61.27
CDX72284	Canola	extracellular, golgi	54.36	61.27
PGSC0003DMT400008268	Potato	extracellular, golgi	52.82	60.95
Solyc07g005180.2.1	Tomato	nucleus	52.82	60.95
KRH12934	Soybean	endoplasmic reticulum	55.38	60.67
VIT_00s0912g00010.t01	Wine grape	cytosol	34.87	59.13
KRH37920	Soybean	endoplasmic reticulum	53.33	58.76
HORVU2Hr1G086810.2	Barley	cytosol	55.38	42.86
EER90798	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	32.82	35.75

Protein Annotations

EnsemblPlants:EES11077	EnsemblPlantsGene:SORBI_3006G137800	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:DUF1068
ncoils:Coil	PANTHER:PTHR32254	PANTHER:PTHR32254:SF4	PFAM:PF06364	ProteinID:EES11077	ProteinID:EES11077.1
RefSeq:XP_002446749.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI0001A86D7A	UniProt:C5YBJ6	MapMan:35.2

Description

hypothetical protein

Coordinates

chr6:+:50013260..50015844

Molecular Weight (calculated)

20941.7 Da

IEP (calculated)

7.684

GRAVY (calculated)

-0.364

Length

195 amino acids

Sequence
(BLAST)

001: MVGGGGRRAA TAAALGRWCL VILAVASALG VSGPAFYWRY KKGFSSSSSS PASTAAVAAS SPSCPPCSCD CPAPLSLKSI APGLANFSIT DCGKNNPELA
101: KEMEKQFVDL LNEELKLQQV VAEEHSHHMN ATLVEAKRQA TQYQREAEKC NAATETCEEA REQSEAAISK EKKLTAMWEQ RARQLGWQDS RATSM

Best Arabidopsis Sequence Match ( AT2G24290.1 )
(BLAST)

001: MARRSGNCMR CLVIFSVVSA LLVCGPALYW KLNKGFVGSA RSTNSICPPC VCDFPPPLSL LQIAPGLANL SITGCGSDDP ELKEEMEKPF VDLLTEELKL
101: QEAVADEHSR HMNVTLAEAK RVASQYQKEA EKCNAATEIC ESARERAQAL LLKERKITFL WERRARQLGW EGE

Arabidopsis Description

Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q9ZQ38]
SUBAcon: [golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.