Factsheet for Os04t0501800-00

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi

Predictor Summary:

plastid 2
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 4
golgi 4
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES11077	Sorghum	mitochondrion, plastid	83.67	84.1
Zm00001d025794_P002	Maize	golgi, plasma membrane, plastid	80.1	83.07
TraesCS2A01G356500.1	Wheat	golgi	79.08	82.45
TraesCS2D01G355400.1	Wheat	golgi	79.59	82.11
TraesCS2B01G375800.1	Wheat	golgi	78.57	81.91
GSMUA_AchrUn_...	Banana	extracellular, golgi	63.27	68.89
CDX68715	Canola	extracellular, golgi	59.18	67.44
VIT_11s0206g00100.t01	Wine grape	extracellular, golgi	59.18	67.05
CDY28236	Canola	extracellular, golgi	59.18	67.05
AT4G30996.1	Thale cress	extracellular, golgi	58.67	66.86
Bra011240.1-P	Field mustard	extracellular, golgi	58.16	65.9
AT2G24290.1	Thale cress	extracellular, golgi	58.16	65.9
CDY23272	Canola	extracellular, golgi	57.65	65.7
Bra010260.1-P	Field mustard	extracellular, golgi	57.65	65.7
CDX72284	Canola	extracellular, golgi	57.14	64.74
CDY51486	Canola	extracellular, golgi	56.63	64.53
PGSC0003DMT400008268	Potato	extracellular, golgi	54.59	63.31
Solyc07g005180.2.1	Tomato	nucleus	54.59	63.31
CDY13405	Canola	cytosol	39.29	63.11
VIT_00s0912g00010.t01	Wine grape	cytosol	36.22	61.74
KRH12934	Soybean	endoplasmic reticulum	55.1	60.67
KRH37920	Soybean	endoplasmic reticulum	53.57	59.32
HORVU2Hr1G086810.2	Barley	cytosol	56.12	43.65
Os03t0777500-01	Rice	endoplasmic reticulum, plasma membrane	32.14	34.43

Protein Annotations

EnsemblPlants:Os04t0501800-00	EnsemblPlantsGene:Os04g0501800	EntrezGene:4336313	InterPro:DUF1068	ncoils:Coil	PANTHER:PTHR32254
PANTHER:PTHR32254:SF4	PFAM:PF06364	ProteinID:BAF15146.1	ProteinID:BAS89941.1	ProteinID:CAD41488.1	ProteinID:EAZ31253.1
RefSeq:XP_015636747.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI00001B0C6F	UniProt:Q0JBZ1	MapMan:35.2

Description

Protein of unknown function DUF1068 family protein. (Os04t0501800-00)

Coordinates

chr4:+:25056744..25058963

Molecular Weight (calculated)

21149.0 Da

IEP (calculated)

7.928

GRAVY (calculated)

-0.339

Length

196 amino acids

Sequence
(BLAST)

001: MGRRGGAAVA AACGRWCLVI LAVASALGVS GPAFYWRYKK GFASSSSSSS VSASAAAVVS PSCPPCSCDC PPPLSLQSIA PGLVNFSTSG CGKNDPELSK
101: EMEKQFVDLL NEELKLQQIV AEEHSHHMNA TLVEAKRQAT QYQREAEKCN AATETCEEAR ERSEAAISKE KKLTALWEQR ARQLGWQDSR PRVTTI

Best Arabidopsis Sequence Match ( AT2G24290.1 )
(BLAST)

001: MARRSGNCMR CLVIFSVVSA LLVCGPALYW KLNKGFVGSA RSTNSICPPC VCDFPPPLSL LQIAPGLANL SITGCGSDDP ELKEEMEKPF VDLLTEELKL
101: QEAVADEHSR HMNVTLAEAK RVASQYQKEA EKCNAATEIC ESARERAQAL LLKERKITFL WERRARQLGW EGE

Arabidopsis Description

Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q9ZQ38]
SUBAcon: [golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.