Subcellular Localization
min:
: max
Winner_takes_all: golgi, extracellular
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 5
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT4G30996.1 | Thale cress | extracellular, golgi | 87.28 | 87.79 |
| VIT_11s0206g00100.t01 | Wine grape | extracellular, golgi | 73.41 | 73.41 |
| VIT_00s0912g00010.t01 | Wine grape | cytosol | 48.55 | 73.04 |
| PGSC0003DMT400008268 | Potato | extracellular, golgi | 65.9 | 67.46 |
| Solyc07g005180.2.1 | Tomato | nucleus | 65.9 | 67.46 |
| GSMUA_AchrUn_... | Banana | extracellular, golgi | 69.36 | 66.67 |
| KRH12934 | Soybean | endoplasmic reticulum | 68.21 | 66.29 |
| KRH37920 | Soybean | endoplasmic reticulum | 65.9 | 64.41 |
| Os04t0501800-00 | Rice | golgi, plasma membrane | 65.9 | 58.16 |
| TraesCS2B01G375800.1 | Wheat | golgi | 63.01 | 57.98 |
| TraesCS2A01G356500.1 | Wheat | golgi | 63.01 | 57.98 |
| TraesCS2D01G355400.1 | Wheat | golgi | 63.01 | 57.37 |
| Zm00001d025794_P002 | Maize | golgi, plasma membrane, plastid | 61.85 | 56.61 |
| EES11077 | Sorghum | mitochondrion, plastid | 61.27 | 54.36 |
| AT4G04360.1 | Thale cress | extracellular, golgi | 42.2 | 41.48 |
| AT1G05070.1 | Thale cress | extracellular | 41.62 | 39.13 |
| AT2G32580.1 | Thale cress | extracellular | 39.88 | 37.7 |
| HORVU2Hr1G086810.2 | Barley | cytosol | 48.55 | 33.33 |
Protein Annotations
| MapMan:35.2 | EntrezGene:816965 | ProteinID:AAD18102.2 | ProteinID:AEC07558.1 | EMBL:AF370163 | ArrayExpress:AT2G24290 |
| EnsemblPlantsGene:AT2G24290 | RefSeq:AT2G24290 | TAIR:AT2G24290 | RefSeq:AT2G24290-TAIR-G | EnsemblPlants:AT2G24290.1 | TAIR:AT2G24290.1 |
| EMBL:AY150492 | ncoils:Coil | InterPro:DUF1068 | GO:GO:0008150 | RefSeq:NP_565567.1 | PFAM:PF06364 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PANTHER:PTHR32254 | PANTHER:PTHR32254:SF4 | UniProt:Q9ZQ38 | SignalP:SignalP-TM | TMHMM:TMhelix | UniParc:UPI00000ABF38 |
Description
Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q9ZQ38]
Coordinates
chr2:+:10338667..10340239
Molecular Weight (calculated)
19241.3 Da
IEP (calculated)
6.492
GRAVY (calculated)
-0.195
Length
173 amino acids
Sequence
(BLAST)
(BLAST)
001: MARRSGNCMR CLVIFSVVSA LLVCGPALYW KLNKGFVGSA RSTNSICPPC VCDFPPPLSL LQIAPGLANL SITGCGSDDP ELKEEMEKPF VDLLTEELKL
101: QEAVADEHSR HMNVTLAEAK RVASQYQKEA EKCNAATEIC ESARERAQAL LLKERKITFL WERRARQLGW EGE
101: QEAVADEHSR HMNVTLAEAK RVASQYQKEA EKCNAATEIC ESARERAQAL LLKERKITFL WERRARQLGW EGE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.