Subcellular Localization
min:
: max
Winner_takes_all: golgi, extracellular
Predictor Summary:
Predictor Summary:
- nucleus 2
- extracellular 5
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc07g005180.2.1 | Tomato | nucleus | 99.41 | 99.41 |
| AT4G30996.1 | Thale cress | extracellular, golgi | 68.64 | 67.44 |
| CDX68715 | Canola | extracellular, golgi | 68.05 | 66.86 |
| CDY28236 | Canola | extracellular, golgi | 68.05 | 66.47 |
| VIT_11s0206g00100.t01 | Wine grape | extracellular, golgi | 68.05 | 66.47 |
| Bra010260.1-P | Field mustard | extracellular, golgi | 67.46 | 66.28 |
| CDY51486 | Canola | extracellular, golgi | 67.46 | 66.28 |
| Bra011240.1-P | Field mustard | extracellular, golgi | 67.46 | 65.9 |
| AT2G24290.1 | Thale cress | extracellular, golgi | 67.46 | 65.9 |
| CDY23272 | Canola | extracellular, golgi | 66.86 | 65.7 |
| CDX72284 | Canola | extracellular, golgi | 66.27 | 64.74 |
| CDY13405 | Canola | cytosol | 44.97 | 62.3 |
| GSMUA_AchrUn_... | Banana | extracellular, golgi | 66.27 | 62.22 |
| VIT_00s0912g00010.t01 | Wine grape | cytosol | 41.42 | 60.87 |
| KRH12934 | Soybean | endoplasmic reticulum | 63.91 | 60.67 |
| KRH37920 | Soybean | endoplasmic reticulum | 62.13 | 59.32 |
| Zm00001d025794_P002 | Maize | golgi, plasma membrane, plastid | 62.13 | 55.56 |
| TraesCS2B01G375800.1 | Wheat | golgi | 61.54 | 55.32 |
| TraesCS2A01G356500.1 | Wheat | golgi | 60.95 | 54.79 |
| Os04t0501800-00 | Rice | golgi, plasma membrane | 63.31 | 54.59 |
| TraesCS2D01G355400.1 | Wheat | golgi | 60.95 | 54.21 |
| EES11077 | Sorghum | mitochondrion, plastid | 60.95 | 52.82 |
| PGSC0003DMT400073558 | Potato | cytosol, nucleus, plastid | 33.73 | 41.01 |
| PGSC0003DMT400002793 | Potato | extracellular, mitochondrion, plasma membrane, plastid | 40.24 | 34.52 |
| HORVU2Hr1G086810.2 | Barley | cytosol | 47.93 | 32.14 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400008268 | EnsemblPlantsGene:PGSC0003DMG400003189 | EntrezGene:102597502 | InterPro:DUF1068 | ncoils:Coil | PANTHER:PTHR32254 |
| PANTHER:PTHR32254:SF4 | PFAM:PF06364 | PGSC:PGSC0003DMG400003189 | RefSeq:XP_006343678.1 | SignalP:SignalP-TM | TMHMM:TMhelix |
| UniParc:UPI000295BF72 | UniProt:M0ZUC1 | MapMan:35.2 | : | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400003189]
Coordinates
chr7:-:438125..444084
Molecular Weight (calculated)
19098.3 Da
IEP (calculated)
7.176
GRAVY (calculated)
-0.240
Length
169 amino acids
Sequence
(BLAST)
(BLAST)
001: MARQSGNCLR CCLVIFAVVS ALCVSGPAIY WKFKKLKVKA AQSCMPCKCD CSPPLSLLEV APGLANLTIT DCGKDDPDLK EEMEKQFVDL LSEELKLQEA
101: VDKEHVHHMN ITFVEARRLA TEYQKEAEKC IATTETCEVG RERAVVLYAK EMKLTNLWER RARQAGWKD
101: VDKEHVHHMN ITFVEARRLA TEYQKEAEKC IATTETCEVG RERAVVLYAK EMKLTNLWER RARQAGWKD
001: MARRSGNCMR CLVIFSVVSA LLVCGPALYW KLNKGFVGSA RSTNSICPPC VCDFPPPLSL LQIAPGLANL SITGCGSDDP ELKEEMEKPF VDLLTEELKL
101: QEAVADEHSR HMNVTLAEAK RVASQYQKEA EKCNAATEIC ESARERAQAL LLKERKITFL WERRARQLGW EGE
101: QEAVADEHSR HMNVTLAEAK RVASQYQKEA EKCNAATEIC ESARERAQAL LLKERKITFL WERRARQLGW EGE
Arabidopsis Description
Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q9ZQ38]
SUBAcon: [golgi,extracellular]
SUBAcon: [golgi,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.