Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 3
- golgi 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES11077 | Sorghum | mitochondrion, plastid | 94.71 | 91.79 |
| TraesCS2B01G375800.1 | Wheat | golgi | 79.89 | 80.32 |
| Os04t0501800-00 | Rice | golgi, plasma membrane | 83.07 | 80.1 |
| TraesCS2A01G356500.1 | Wheat | golgi | 79.37 | 79.79 |
| TraesCS2D01G355400.1 | Wheat | golgi | 78.84 | 78.42 |
| GSMUA_AchrUn_... | Banana | extracellular, golgi | 63.49 | 66.67 |
| AT4G30996.1 | Thale cress | extracellular, golgi | 58.2 | 63.95 |
| CDX68715 | Canola | extracellular, golgi | 58.2 | 63.95 |
| CDY28236 | Canola | extracellular, golgi | 58.2 | 63.58 |
| Bra010260.1-P | Field mustard | extracellular, golgi | 57.14 | 62.79 |
| Bra011240.1-P | Field mustard | extracellular, golgi | 57.14 | 62.43 |
| CDY13405 | Canola | cytosol | 40.21 | 62.3 |
| CDY23272 | Canola | extracellular, golgi | 56.61 | 62.21 |
| PGSC0003DMT400008268 | Potato | extracellular, golgi | 55.56 | 62.13 |
| Solyc07g005180.2.1 | Tomato | nucleus | 55.56 | 62.13 |
| AT2G24290.1 | Thale cress | extracellular, golgi | 56.61 | 61.85 |
| CDY51486 | Canola | extracellular, golgi | 56.08 | 61.63 |
| CDX72284 | Canola | extracellular, golgi | 56.08 | 61.27 |
| VIT_11s0206g00100.t01 | Wine grape | extracellular, golgi | 56.08 | 61.27 |
| KRH12934 | Soybean | endoplasmic reticulum | 56.08 | 59.55 |
| KRH37920 | Soybean | endoplasmic reticulum | 55.03 | 58.76 |
| VIT_00s0912g00010.t01 | Wine grape | cytosol | 35.45 | 58.26 |
| HORVU2Hr1G086810.2 | Barley | cytosol | 56.61 | 42.46 |
| Zm00001d034279_P001 | Maize | extracellular | 34.39 | 36.11 |
Protein Annotations
| EMBL:BT036602 | EnsemblPlants:Zm00001d025794_P002 | EnsemblPlants:Zm00001d025794_T002 | EnsemblPlantsGene:Zm00001d025794 | EntrezGene:100194145 | GO:GO:0005575 |
| GO:GO:0016020 | GO:GO:0016021 | InterPro:DUF1068 | ncoils:Coil | PANTHER:PTHR32254 | PANTHER:PTHR32254:SF4 |
| PFAM:PF06364 | ProteinID:AQK44605.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI00017B7113 | UniProt:B4FHL4 |
| MapMan:35.2 | : | : | : | : | : |
Description
OSJNBa0029H02.27 protein; protein
Coordinates
chr10:+:129812817..129815752
Molecular Weight (calculated)
20506.3 Da
IEP (calculated)
7.705
GRAVY (calculated)
-0.392
Length
189 amino acids
Sequence
(BLAST)
(BLAST)
001: MVGGGGRRAA LGRWCLVILA VASALGVSGP AFYWRYKKGF SSSSPSSTAA AVASSPSCPP CSCDCPAPLS LKSIAPGLAN FSITDCGKNN PELAKEMEKQ
101: FVDLLNEELK LQQVVAEEHS HHMNATLVEA KRQATQYQRE AEKCNAATET CEEAREQSEV AISKEKKLTA MWEQRARQLG WHDSRATSM
101: FVDLLNEELK LQQVVAEEHS HHMNATLVEA KRQATQYQRE AEKCNAATET CEEAREQSEV AISKEKKLTA MWEQRARQLG WHDSRATSM
001: MARRSGNCMR CLVIFSVVSA LLVCGPALYW KLNKGFVGSA RSTNSICPPC VCDFPPPLSL LQIAPGLANL SITGCGSDDP ELKEEMEKPF VDLLTEELKL
101: QEAVADEHSR HMNVTLAEAK RVASQYQKEA EKCNAATEIC ESARERAQAL LLKERKITFL WERRARQLGW EGE
101: QEAVADEHSR HMNVTLAEAK RVASQYQKEA EKCNAATEIC ESARERAQAL LLKERKITFL WERRARQLGW EGE
Arabidopsis Description
Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q9ZQ38]
SUBAcon: [golgi,extracellular]
SUBAcon: [golgi,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.