Factsheet for TraesCS2A01G356500.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

extracellular 3
golgi 5
plasma membrane 3
endoplasmic reticulum 3
vacuole 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	mitochondrion, plastid, secretory
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G375800.1	Wheat	golgi	96.28	96.28
TraesCS2D01G355400.1	Wheat	golgi	95.21	94.21
Zm00001d025794_P002	Maize	golgi, plasma membrane, plastid	79.79	79.37
Os04t0501800-00	Rice	golgi, plasma membrane	82.45	79.08
EES11077	Sorghum	mitochondrion, plastid	79.79	76.92
AT4G30996.1	Thale cress	extracellular, golgi	59.57	65.12
GSMUA_AchrUn_...	Banana	extracellular, golgi	62.23	65.0
CDX68715	Canola	extracellular, golgi	59.04	64.53
CDY28236	Canola	extracellular, golgi	59.04	64.16
Bra010260.1-P	Field mustard	extracellular, golgi	58.51	63.95
Bra011240.1-P	Field mustard	extracellular, golgi	58.51	63.58
CDY23272	Canola	extracellular, golgi	57.98	63.37
CDY51486	Canola	extracellular, golgi	57.98	63.37
AT2G24290.1	Thale cress	extracellular, golgi	57.98	63.01
VIT_11s0206g00100.t01	Wine grape	extracellular, golgi	57.45	62.43
CDX72284	Canola	extracellular, golgi	56.91	61.85
PGSC0003DMT400008268	Potato	extracellular, golgi	54.79	60.95
Solyc07g005180.2.1	Tomato	nucleus	54.79	60.95
CDY13405	Canola	cytosol	38.3	59.02
VIT_00s0912g00010.t01	Wine grape	cytosol	35.64	58.26
KRH12934	Soybean	endoplasmic reticulum	54.79	57.87
KRH37920	Soybean	endoplasmic reticulum	53.19	56.5
HORVU2Hr1G086810.2	Barley	cytosol	67.55	50.4
TraesCS5A01G412400.1	Wheat	cytosol, mitochondrion, nucleus	23.4	37.93
TraesCS5A01G412700.1	Wheat	endoplasmic reticulum, plasma membrane	32.98	34.83
TraesCS5A01G412800.1	Wheat	extracellular, plasma membrane	32.45	34.27
TraesCS5A01G412200.1	Wheat	plastid	33.51	34.05

Protein Annotations

EnsemblPlants:TraesCS2A01G356500.1	EnsemblPlantsGene:TraesCS2A01G356500	InterPro:DUF1068	ncoils:Coil	PANTHER:PTHR32254	PANTHER:PTHR32254:SF4
PFAM:PF06364	SEG:seg	TMHMM:TMhelix	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr2A:+:601335367..601337352

Molecular Weight (calculated)

20308.1 Da

IEP (calculated)

7.640

GRAVY (calculated)

-0.298

Length

188 amino acids

Sequence
(BLAST)

001: MAVGGRRAAA AACGRWCLVI LAVASALGVS GPALYWRYNK GFSSAAAAAV SAPSCPPCTC DCPPPLSLQS IAPGLVNFSI SACGTNDPER TKEMEKQFVD
101: LLNEELKLQQ VVAEEHIHHM NATLVEAKRQ ATLYQREAEK CNAATETCEE AREKSEGAIS KERKLTALWE RRARESGWQD SRAATAAR

Best Arabidopsis Sequence Match ( AT2G24290.1 )
(BLAST)

001: MARRSGNCMR CLVIFSVVSA LLVCGPALYW KLNKGFVGSA RSTNSICPPC VCDFPPPLSL LQIAPGLANL SITGCGSDDP ELKEEMEKPF VDLLTEELKL
101: QEAVADEHSR HMNVTLAEAK RVASQYQKEA EKCNAATEIC ESARERAQAL LLKERKITFL WERRARQLGW EGE

Arabidopsis Description

Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q9ZQ38]
SUBAcon: [extracellular,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.