Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_00s0912g00010.t01 | Wine grape | cytosol | 67.21 | 71.3 |
| CDY23272 | Canola | extracellular, golgi | 86.89 | 61.63 |
| CDX68715 | Canola | extracellular, golgi | 86.07 | 61.05 |
| AT4G30996.1 | Thale cress | extracellular, golgi | 86.07 | 61.05 |
| CDX72284 | Canola | extracellular, golgi | 86.07 | 60.69 |
| CDY28236 | Canola | extracellular, golgi | 86.07 | 60.69 |
| CDY51486 | Canola | extracellular, golgi | 85.25 | 60.47 |
| VIT_11s0206g00100.t01 | Wine grape | extracellular, golgi | 76.23 | 53.76 |
| GSMUA_AchrUn_... | Banana | extracellular, golgi | 68.85 | 46.67 |
| KRH37920 | Soybean | endoplasmic reticulum | 67.21 | 46.33 |
| KRH12934 | Soybean | endoplasmic reticulum | 66.39 | 45.51 |
| Solyc07g005180.2.1 | Tomato | nucleus | 62.3 | 44.97 |
| PGSC0003DMT400008268 | Potato | extracellular, golgi | 62.3 | 44.97 |
| Zm00001d025794_P002 | Maize | golgi, plasma membrane, plastid | 62.3 | 40.21 |
| EES11077 | Sorghum | mitochondrion, plastid | 63.11 | 39.49 |
| Os04t0501800-00 | Rice | golgi, plasma membrane | 63.11 | 39.29 |
| TraesCS2A01G356500.1 | Wheat | golgi | 59.02 | 38.3 |
| TraesCS2B01G375800.1 | Wheat | golgi | 59.02 | 38.3 |
| TraesCS2D01G355400.1 | Wheat | golgi | 57.38 | 36.84 |
| CDY18288 | Canola | extracellular | 42.62 | 34.67 |
| CDY21300 | Canola | nucleus | 43.44 | 34.19 |
| CDY53389 | Canola | extracellular | 41.8 | 34.0 |
| CDX90859 | Canola | extracellular | 46.72 | 32.57 |
| CDX90862 | Canola | extracellular | 43.44 | 30.29 |
| CDX94551 | Canola | extracellular, golgi, vacuole | 42.62 | 29.21 |
| CDY61410 | Canola | extracellular | 43.44 | 28.96 |
| CDY12195 | Canola | extracellular | 43.44 | 28.96 |
| HORVU2Hr1G086810.2 | Barley | cytosol | 58.2 | 28.17 |
Protein Annotations
| EnsemblPlants:CDY13405 | EnsemblPlantsGene:GSBRNA2T00077675001 | InterPro:DUF1068 | PANTHER:PTHR32254 | PANTHER:PTHR32254:SF4 | PFAM:PF06364 |
| ProteinID:CDY13405 | ProteinID:CDY13405.1 | UniParc:UPI0004EE06CB | UniProt:A0A078FG46 | MapMan:35.2 | : |
Description
BnaA03g51230DBnaA03g51230D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FG46]
Coordinates
chrLK032035:+:112245..114345
Molecular Weight (calculated)
13744.2 Da
IEP (calculated)
4.641
GRAVY (calculated)
-0.617
Length
122 amino acids
Sequence
(BLAST)
(BLAST)
001: MVLPTSCLSP RDCSCLANLS VTDCGGDDLE LKQEMEKQFV DLVTEELKLQ EAVADEHSRH MNVTLGEAKR VASQYQKEAE KCNAATEICE SARERAEALL
101: IKERKITSLW EKRARQSGWE GE
101: IKERKITSLW EKRARQSGWE GE
001: MARRSGNCMR CLVIFSVVSA LLVCGPALYW KLNKGFVGSA RSTNSICPPC VCDFPPPLSL LQIAPGLANL SITGCGSDDP ELKEEMEKPF VDLLTEELKL
101: QEAVADEHSR HMNVTLAEAK RVASQYQKEA EKCNAATEIC ESARERAQAL LLKERKITFL WERRARQLGW EGE
101: QEAVADEHSR HMNVTLAEAK RVASQYQKEA EKCNAATEIC ESARERAQAL LLKERKITFL WERRARQLGW EGE
Arabidopsis Description
Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q9ZQ38]
SUBAcon: [golgi,extracellular]
SUBAcon: [golgi,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.