Subcellular Localization
min:
: max
Winner_takes_all: golgi, extracellular
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 5
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 5
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_00s0912g00010.t01 | Wine grape | cytosol | 58.96 | 88.7 |
| CDY13405 | Canola | cytosol | 53.76 | 76.23 |
| CDY28236 | Canola | extracellular, golgi | 75.72 | 75.72 |
| CDX68715 | Canola | extracellular, golgi | 75.14 | 75.58 |
| Bra011240.1-P | Field mustard | extracellular, golgi | 75.14 | 75.14 |
| AT4G30996.1 | Thale cress | extracellular, golgi | 74.57 | 75.0 |
| CDY23272 | Canola | extracellular, golgi | 73.41 | 73.84 |
| AT2G24290.1 | Thale cress | extracellular, golgi | 73.41 | 73.41 |
| Bra010260.1-P | Field mustard | extracellular, golgi | 72.83 | 73.26 |
| CDY51486 | Canola | extracellular, golgi | 72.25 | 72.67 |
| CDX72284 | Canola | extracellular, golgi | 72.25 | 72.25 |
| Solyc07g005180.2.1 | Tomato | nucleus | 67.05 | 68.64 |
| PGSC0003DMT400008268 | Potato | extracellular, golgi | 66.47 | 68.05 |
| GSMUA_AchrUn_... | Banana | extracellular, golgi | 68.79 | 66.11 |
| KRH37920 | Soybean | endoplasmic reticulum | 67.63 | 66.1 |
| KRH12934 | Soybean | endoplasmic reticulum | 67.05 | 65.17 |
| Os04t0501800-00 | Rice | golgi, plasma membrane | 67.05 | 59.18 |
| TraesCS2B01G375800.1 | Wheat | golgi | 63.58 | 58.51 |
| TraesCS2A01G356500.1 | Wheat | golgi | 62.43 | 57.45 |
| TraesCS2D01G355400.1 | Wheat | golgi | 62.43 | 56.84 |
| Zm00001d025794_P002 | Maize | golgi, plasma membrane, plastid | 61.27 | 56.08 |
| EES11077 | Sorghum | mitochondrion, plastid | 61.27 | 54.36 |
| VIT_12s0059g01040.t01 | Wine grape | extracellular, plasma membrane | 42.77 | 37.19 |
| HORVU2Hr1G086810.2 | Barley | cytosol | 49.13 | 33.73 |
Protein Annotations
| ArrayExpress:VIT_11s0206g00100 | EMBL:FN594985 | EnsemblPlants:VIT_11s0206g00100.t01 | EnsemblPlantsGene:VIT_11s0206g00100 | EntrezGene:100257374 | EntrezGene:LOC100257374 |
| InterPro:DUF1068 | PANTHER:PTHR32254 | PANTHER:PTHR32254:SF4 | PFAM:PF06364 | ProteinID:CBI18674 | ProteinID:CBI18674.3 |
| RefSeq:XP_002262851 | RefSeq:XP_002262851.1 | TMHMM:TMhelix | unigene:Vvi.5819 | UniParc:UPI0001985F24 | UniProt:D7SSP1 |
| wikigene:100257374 | wikigene:LOC100257374 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr11:-:7439220..7444149
Molecular Weight (calculated)
19133.1 Da
IEP (calculated)
7.828
GRAVY (calculated)
-0.258
Length
173 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRRSGGCVR CCLVVFAVLS ALCVSGPAWY WRLKKAMGSG ENASSSCAPC ICDCPPPLSL LKIAPGLVNL SVTGCGGDDP DLRREMEKQF VDLLTEELKL
101: QEAVAAEHAR HMNITFLEAK RVASQYQREA EKCNSATETC EGARERAEAL LIKERKVTSL WERRARRLGW EGE
101: QEAVAAEHAR HMNITFLEAK RVASQYQREA EKCNSATETC EGARERAEAL LIKERKVTSL WERRARRLGW EGE
001: MARRSGNCMR CLVIFSVVSA LLVCGPALYW KLNKGFVGSA RSTNSICPPC VCDFPPPLSL LQIAPGLANL SITGCGSDDP ELKEEMEKPF VDLLTEELKL
101: QEAVADEHSR HMNVTLAEAK RVASQYQKEA EKCNAATEIC ESARERAQAL LLKERKITFL WERRARQLGW EGE
101: QEAVADEHSR HMNVTLAEAK RVASQYQKEA EKCNAATEIC ESARERAQAL LLKERKITFL WERRARQLGW EGE
Arabidopsis Description
Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q9ZQ38]
SUBAcon: [golgi,extracellular]
SUBAcon: [golgi,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.