Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- extracellular 3
- golgi 5
- plasma membrane 3
- endoplasmic reticulum 3
- vacuole 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G375800.1 | Wheat | golgi | 95.26 | 96.28 |
| TraesCS2A01G356500.1 | Wheat | golgi | 94.21 | 95.21 |
| Os04t0501800-00 | Rice | golgi, plasma membrane | 82.11 | 79.59 |
| Zm00001d025794_P002 | Maize | golgi, plasma membrane, plastid | 78.42 | 78.84 |
| EES11077 | Sorghum | mitochondrion, plastid | 78.95 | 76.92 |
| GSMUA_AchrUn_... | Banana | extracellular, golgi | 61.58 | 65.0 |
| AT4G30996.1 | Thale cress | extracellular, golgi | 57.37 | 63.37 |
| CDY28236 | Canola | extracellular, golgi | 57.37 | 63.01 |
| AT2G24290.1 | Thale cress | extracellular, golgi | 57.37 | 63.01 |
| CDX68715 | Canola | extracellular, golgi | 56.84 | 62.79 |
| Bra011240.1-P | Field mustard | extracellular, golgi | 56.84 | 62.43 |
| VIT_11s0206g00100.t01 | Wine grape | extracellular, golgi | 56.84 | 62.43 |
| Bra010260.1-P | Field mustard | extracellular, golgi | 55.79 | 61.63 |
| CDY23272 | Canola | extracellular, golgi | 55.79 | 61.63 |
| CDY51486 | Canola | extracellular, golgi | 55.26 | 61.05 |
| PGSC0003DMT400008268 | Potato | extracellular, golgi | 54.21 | 60.95 |
| Solyc07g005180.2.1 | Tomato | nucleus | 54.21 | 60.95 |
| CDX72284 | Canola | extracellular, golgi | 55.26 | 60.69 |
| VIT_00s0912g00010.t01 | Wine grape | cytosol | 35.26 | 58.26 |
| KRH12934 | Soybean | endoplasmic reticulum | 54.21 | 57.87 |
| CDY13405 | Canola | cytosol | 36.84 | 57.38 |
| KRH37920 | Soybean | endoplasmic reticulum | 52.63 | 56.5 |
| HORVU2Hr1G086810.2 | Barley | cytosol | 66.84 | 50.4 |
| TraesCS5D01G421600.1 | Wheat | cytosol, mitochondrion, nucleus | 24.21 | 41.44 |
| TraesCS5D01G421400.1 | Wheat | endoplasmic reticulum, plasma membrane | 32.63 | 34.83 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G355400.1 | EnsemblPlantsGene:TraesCS2D01G355400 | InterPro:DUF1068 | ncoils:Coil | PANTHER:PTHR32254 | PANTHER:PTHR32254:SF4 |
| PFAM:PF06364 | SEG:seg | TMHMM:TMhelix | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr2D:+:457651443..457653487
Molecular Weight (calculated)
20522.5 Da
IEP (calculated)
8.144
GRAVY (calculated)
-0.295
Length
190 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVGGRRAAA AACGRWCLVI LAVASALGVS GPALYWRYKK GFSSPASGAA AVSAPSCPPC TCDCPPPLSL QSIAPGLMNF SISACGTNDP ERTKEMAKQF
101: VDLLNEELKL QQVVAEEHIH HMNATLVEAK RQATLYQREA EKCNAATETC EEAREKSEGA ISKERKLTAL WERRARELGW QDSRAATTAR
101: VDLLNEELKL QQVVAEEHIH HMNATLVEAK RQATLYQREA EKCNAATETC EEAREKSEGA ISKERKLTAL WERRARELGW QDSRAATTAR
001: MARRSGNCMR CLVIFSVVSA LLVCGPALYW KLNKGFVGSA RSTNSICPPC VCDFPPPLSL LQIAPGLANL SITGCGSDDP ELKEEMEKPF VDLLTEELKL
101: QEAVADEHSR HMNVTLAEAK RVASQYQKEA EKCNAATEIC ESARERAQAL LLKERKITFL WERRARQLGW EGE
101: QEAVADEHSR HMNVTLAEAK RVASQYQKEA EKCNAATEIC ESARERAQAL LLKERKITFL WERRARQLGW EGE
Arabidopsis Description
Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q9ZQ38]
SUBAcon: [extracellular,golgi]
SUBAcon: [extracellular,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.