Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 8
- vacuole 4
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra005603.1-P | Field mustard | extracellular | 89.62 | 89.62 |
| CDY61410 | Canola | extracellular | 89.62 | 89.62 |
| CDY12195 | Canola | extracellular | 89.07 | 89.07 |
| AT1G05070.1 | Thale cress | extracellular | 79.23 | 78.8 |
| VIT_12s0059g01040.t01 | Wine grape | extracellular, plasma membrane | 67.76 | 62.31 |
| KRH56166 | Soybean | endoplasmic reticulum | 60.11 | 58.82 |
| KRH25351 | Soybean | endoplasmic reticulum | 59.56 | 57.67 |
| Solyc07g049730.2.1 | Tomato | nucleus | 61.2 | 56.85 |
| PGSC0003DMT400002793 | Potato | extracellular, mitochondrion, plasma membrane, plastid | 61.2 | 56.85 |
| KRH22588 | Soybean | extracellular | 57.92 | 55.79 |
| GSMUA_Achr5P24760_001 | Banana | golgi | 56.28 | 54.5 |
| TraesCS5B01G416100.1 | Wheat | cytosol, mitochondrion, nucleus | 33.88 | 53.45 |
| AT4G04360.1 | Thale cress | extracellular, golgi | 50.82 | 52.84 |
| TraesCS5A01G412400.1 | Wheat | cytosol, mitochondrion, nucleus | 32.79 | 51.72 |
| TraesCS5D01G421600.1 | Wheat | cytosol, mitochondrion, nucleus | 31.15 | 51.35 |
| TraesCS5D01G421400.1 | Wheat | endoplasmic reticulum, plasma membrane | 49.18 | 50.56 |
| EER90798 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 49.18 | 50.28 |
| TraesCS5B01G416000.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 50.27 | 49.73 |
| TraesCS5A01G412700.1 | Wheat | endoplasmic reticulum, plasma membrane | 48.09 | 49.44 |
| HORVU5Hr1G099550.1 | Barley | endoplasmic reticulum, plasma membrane | 49.18 | 49.18 |
| TraesCS5A01G412800.1 | Wheat | extracellular, plasma membrane | 47.54 | 48.88 |
| TraesCS5A01G412200.1 | Wheat | plastid | 49.18 | 48.65 |
| TraesCS5B01G416300.1 | Wheat | endoplasmic reticulum, plasma membrane | 47.54 | 48.6 |
| Os03t0777500-01 | Rice | endoplasmic reticulum, plasma membrane | 48.09 | 48.09 |
| Zm00001d034279_P001 | Maize | extracellular | 46.45 | 47.22 |
| AT4G30996.1 | Thale cress | extracellular, golgi | 38.8 | 41.28 |
| AT2G24290.1 | Thale cress | extracellular, golgi | 37.7 | 39.88 |
| GSMUA_Achr6P04630_001 | Banana | plastid | 54.64 | 38.46 |
| HORVU5Hr1G099640.1 | Barley | extracellular, mitochondrion, plasma membrane, plastid | 44.81 | 37.61 |
Protein Annotations
| MapMan:35.2 | EntrezGene:817818 | EntrezGene:839330 | ProteinID:AAC25940.2 | ProteinID:AEC08701.1 | ProteinID:AEE27787.1 |
| EMBL:AK227659 | ArrayExpress:AT2G32580 | EnsemblPlantsGene:AT2G32580 | RefSeq:AT2G32580 | TAIR:AT2G32580 | RefSeq:AT2G32580-TAIR-G |
| EnsemblPlants:AT2G32580.1 | TAIR:AT2G32580.1 | EMBL:AY048292 | EMBL:AY085193 | EMBL:AY090949 | EMBL:AY122927 |
| EMBL:AY139793 | ncoils:Coil | InterPro:DUF1068 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005768 | GO:GO:0005794 | GO:GO:0005802 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | RefSeq:NP_563728.1 | RefSeq:NP_565746.1 | UniProt:O80895 | PFAM:PF06364 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR32254 |
| PANTHER:PTHR32254:SF11 | TMHMM:TMhelix | UniParc:UPI00000A26BC | SEG:seg | : | : |
Description
Expressed protein [Source:UniProtKB/TrEMBL;Acc:O80895]
Coordinates
chr2:+:13827425..13829317
Molecular Weight (calculated)
19967.9 Da
IEP (calculated)
7.272
GRAVY (calculated)
-0.467
Length
183 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKHTAALKV GLALLALSMI GYILGPPLYW HLTEALAVSA TSCSACVCDC SSLPLLTIPT GLSNGSFTDC AKRDPEVNED TEKNYAELLT EELKQREAAS
101: MEKHKRVDTG LLEAKKITSS YQKEADKCNS GMETCEEARE KAEKALVEQK KLTSMWEQRA RQKGYKDGAT KSTVKSKSGT EVA
101: MEKHKRVDTG LLEAKKITSS YQKEADKCNS GMETCEEARE KAEKALVEQK KLTSMWEQRA RQKGYKDGAT KSTVKSKSGT EVA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.