Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- peroxisome 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU2Hr1G084420.1 | |
| HORVU7Hr1G088900.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G50430.1 | HORVU2Hr1G084420.1 | AT1G27300.1 | 21798944 |
| AT1G50430.1 | HORVU7Hr1G088900.1 | AT4G19030.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G488600.1 | Wheat | plasma membrane | 76.97 | 90.53 |
| TraesCS3D01G484700.1 | Wheat | golgi, peroxisome, plasma membrane | 77.15 | 90.35 |
| TraesCS3B01G536500.1 | Wheat | plasma membrane | 76.4 | 89.47 |
| EES05015 | Sorghum | plasma membrane | 74.53 | 87.67 |
| Os02t0465400-01 | Rice | plasma membrane | 73.78 | 87.56 |
| GSMUA_Achr6P30910_001 | Banana | plasma membrane | 68.54 | 84.33 |
| Zm00001d016463_P001 | Maize | plastid | 73.22 | 84.27 |
| Bra030492.1-P | Field mustard | extracellular, plasma membrane | 21.54 | 83.33 |
| VIT_09s0054g00930.t01 | Wine grape | plasma membrane | 66.67 | 82.03 |
| KRH44662 | Soybean | endoplasmic reticulum | 65.73 | 81.25 |
| CDY03603 | Canola | plasma membrane | 65.36 | 80.79 |
| Solyc01g009310.2.1 | Tomato | nucleus, plasma membrane | 65.54 | 80.65 |
| PGSC0003DMT400038174 | Potato | mitochondrion, plasma membrane | 65.54 | 80.65 |
| Bra014252.1-P | Field mustard | plasma membrane | 65.17 | 80.56 |
| CDY45061 | Canola | plasma membrane | 65.17 | 80.56 |
| AT1G50430.1 | Thale cress | plasma membrane | 64.79 | 80.09 |
| Solyc06g074090.2.1 | Tomato | nucleus | 63.11 | 77.65 |
| PGSC0003DMT400015184 | Potato | plasma membrane | 62.55 | 76.96 |
| CDY29319 | Canola | plasma membrane | 52.43 | 67.31 |
| Bra041028.1-P | Field mustard | plasma membrane | 41.95 | 65.5 |
| CDY07287 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 13.48 | 50.0 |
| CDY07286 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 21.91 | 37.86 |
| HORVU1Hr1G091090.9 | Barley | mitochondrion, peroxisome, plasma membrane, plastid | 20.04 | 24.83 |
Protein Annotations
| Gene3D:1.20.120.1630 | MapMan:5.5.1.6 | UniProt:A0A287MKX7 | InterPro:Ergosterol_biosynth_ERG4_ERG24 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 | GO:GO:0005886 |
| GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009918 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016132 | GO:GO:0016628 | GO:GO:0055114 | EnsemblPlantsGene:HORVU3Hr1G107040 | EnsemblPlants:HORVU3Hr1G107040.11 |
| PFAM:PF01222 | ScanProsite:PS01017 | ScanProsite:PS01018 | PANTHER:PTHR21257 | PANTHER:PTHR21257:SF38 | InterPro:Sterol_reductase_CS |
| TMHMM:TMhelix | UniParc:UPI000B464034 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chrchr3H:-:672215516..672221382
Molecular Weight (calculated)
61108.8 Da
IEP (calculated)
10.287
GRAVY (calculated)
-0.009
Length
534 amino acids
Sequence
(BLAST)
(BLAST)
001: TRRAIRRPRS NPSTWPSRSP QSRRRRPRFK EVHAHAKILF FSSRRQRRRR RRWPQIHTSS LINNRHPSPL PLHARARSRG PGAMGKQQQQ PKPAPAAPPP
101: QPSKTAHSPL LTYASMVTLL SLCPPFVILL WYTMVHADGS VLQIYEHLRD HGILEGLKAI WPAPTLVAGK IILGFALFEA ALQLLLPGKR FEGPISPSGN
201: VPVYKANGLL AYAVTLLTYL SLWWFGIFNP AIVYDHLGEI YSALVFGSLV FCLLLYIKGH VAPSSSDSGS AGNVIIDFYW GMELYPRIGK HFDIKVFTNC
301: RFGMMSWAVL AVTYCIKQYE MNGRVADSML VNTALMLIYI TKFFWWESGY WCTMDIAHDR AGFYICWGCL VWVPSIYTSP GMYLVNHPVN LGPQLALSIL
401: LAGILCIYIN YDCDRQRQEF RRTNGKATVW GKAPSKIIAS YQTTKGETKT SLLLTSGWWG FSRHFHYAPE ILAAFFWTVP ALFTHFMPYF YVIFLTILLL
501: DRAKRDDDRC STKYGKYWKM YCNRVPYRVV PGIY
101: QPSKTAHSPL LTYASMVTLL SLCPPFVILL WYTMVHADGS VLQIYEHLRD HGILEGLKAI WPAPTLVAGK IILGFALFEA ALQLLLPGKR FEGPISPSGN
201: VPVYKANGLL AYAVTLLTYL SLWWFGIFNP AIVYDHLGEI YSALVFGSLV FCLLLYIKGH VAPSSSDSGS AGNVIIDFYW GMELYPRIGK HFDIKVFTNC
301: RFGMMSWAVL AVTYCIKQYE MNGRVADSML VNTALMLIYI TKFFWWESGY WCTMDIAHDR AGFYICWGCL VWVPSIYTSP GMYLVNHPVN LGPQLALSIL
401: LAGILCIYIN YDCDRQRQEF RRTNGKATVW GKAPSKIIAS YQTTKGETKT SLLLTSGWWG FSRHFHYAPE ILAAFFWTVP ALFTHFMPYF YVIFLTILLL
501: DRAKRDDDRC STKYGKYWKM YCNRVPYRVV PGIY
001: MAETVHSPIV TYASMLSLLA FCPPFVILLW YTMVHQDGSV TQTFGFFWEN GVQGLINIWP RPTLIAWKII FCYGAFEAIL QLLLPGKRVE GPISPAGNRP
101: VYKANGLAAY FVTLATYLGL WWFGIFNPAI VYDHLGEIFS ALIFGSFIFC VLLYIKGHVA PSSSDSGSCG NLIIDFYWGM ELYPRIGKSF DIKVFTNCRF
201: GMMSWAVLAV TYCIKQYEIN GKVSDSMLVN TILMLVYVTK FFWWEAGYWN TMDIAHDRAG FYICWGCLVW VPSVYTSPGM YLVNHPVELG TQLAIYILVA
301: GILCIYINYD CDRQRQEFRR TNGKCLVWGR APSKIVASYT TTSGETKTSL LLTSGWWGLA RHFHYVPEIL SAFFWTVPAL FDNFLAYFYV IFLTLLLFDR
401: AKRDDDRCRS KYGKYWKLYC EKVKYRIIPG IY
101: VYKANGLAAY FVTLATYLGL WWFGIFNPAI VYDHLGEIFS ALIFGSFIFC VLLYIKGHVA PSSSDSGSCG NLIIDFYWGM ELYPRIGKSF DIKVFTNCRF
201: GMMSWAVLAV TYCIKQYEIN GKVSDSMLVN TILMLVYVTK FFWWEAGYWN TMDIAHDRAG FYICWGCLVW VPSVYTSPGM YLVNHPVELG TQLAIYILVA
301: GILCIYINYD CDRQRQEFRR TNGKCLVWGR APSKIVASYT TTSGETKTSL LLTSGWWGLA RHFHYVPEIL SAFFWTVPAL FDNFLAYFYV IFLTLLLFDR
401: AKRDDDRCRS KYGKYWKLYC EKVKYRIIPG IY
Arabidopsis Description
DWF57-dehydrocholesterol reductase [Source:UniProtKB/Swiss-Prot;Acc:Q9LDU6]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.