Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- golgi 5
- endoplasmic reticulum 5
- plasma membrane 7
- vacuole 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY03603 | Canola | plasma membrane | 94.68 | 94.68 |
| Bra014252.1-P | Field mustard | plasma membrane | 94.44 | 94.44 |
| CDY45061 | Canola | plasma membrane | 94.44 | 94.44 |
| Bra030492.1-P | Field mustard | extracellular, plasma membrane | 29.4 | 92.03 |
| VIT_09s0054g00930.t01 | Wine grape | plasma membrane | 86.81 | 86.41 |
| KRH44662 | Soybean | endoplasmic reticulum | 84.03 | 84.03 |
| Solyc01g009310.2.1 | Tomato | nucleus, plasma membrane | 82.64 | 82.26 |
| GSMUA_Achr6P30910_001 | Banana | plasma membrane | 82.41 | 82.03 |
| PGSC0003DMT400038174 | Potato | mitochondrion, plasma membrane | 82.41 | 82.03 |
| EES05015 | Sorghum | plasma membrane | 84.03 | 79.96 |
| Os02t0465400-01 | Rice | plasma membrane | 82.87 | 79.56 |
| PGSC0003DMT400015184 | Potato | plasma membrane | 78.24 | 77.88 |
| Solyc06g074090.2.1 | Tomato | nucleus | 78.01 | 77.65 |
| CDY29319 | Canola | plasma membrane | 74.07 | 76.92 |
| Zm00001d016463_P001 | Maize | plastid | 81.94 | 76.29 |
| TraesCS3A01G488600.1 | Wheat | plasma membrane | 79.17 | 75.33 |
| TraesCS3D01G484700.1 | Wheat | golgi, peroxisome, plasma membrane | 79.4 | 75.22 |
| TraesCS3B01G536500.1 | Wheat | plasma membrane | 79.17 | 75.0 |
| Bra041028.1-P | Field mustard | plasma membrane | 57.41 | 72.51 |
| CDY07287 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 23.15 | 69.44 |
| HORVU3Hr1G107040.11 | Barley | plastid | 80.09 | 64.79 |
| CDY07286 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 30.32 | 42.39 |
| AT3G52940.1 | Thale cress | plasma membrane | 22.69 | 26.56 |
Protein Annotations
| Gene3D:1.20.120.1630 | MapMan:5.5.1.6 | EntrezGene:841465 | UniProt:A0A178W1U5 | ProteinID:AAF63498.1 | ProteinID:AAF87888.1 |
| ProteinID:AEE32547.1 | EMBL:AK227279 | ArrayExpress:AT1G50430 | EnsemblPlantsGene:AT1G50430 | RefSeq:AT1G50430 | TAIR:AT1G50430 |
| RefSeq:AT1G50430-TAIR-G | EnsemblPlants:AT1G50430.1 | TAIR:AT1G50430.1 | EMBL:AY099589 | Unigene:At.25165 | EMBL:BT000245 |
| Symbol:DWF5 | InterPro:Ergosterol_biosynth_ERG4_ERG24 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005789 |
| GO:GO:0005794 | GO:GO:0005886 | GO:GO:0006629 | GO:GO:0006694 | GO:GO:0006695 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008202 | GO:GO:0008203 | GO:GO:0009058 | GO:GO:0009918 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016126 | GO:GO:0016132 | GO:GO:0016491 | GO:GO:0016628 | GO:GO:0047598 |
| GO:GO:0055114 | RefSeq:NP_175460.1 | ProteinID:OAP12054.1 | PFAM:PF01222 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | ScanProsite:PS01017 | ScanProsite:PS01018 |
| PANTHER:PTHR21257 | PANTHER:PTHR21257:SF38 | UniProt:Q0WU95 | UniProt:Q9LDU6 | InterPro:Sterol_reductase_CS | TMHMM:TMhelix |
| EMBL:U49398 | UniParc:UPI00000011A5 | : | : | : | : |
Description
DWF57-dehydrocholesterol reductase [Source:UniProtKB/Swiss-Prot;Acc:Q9LDU6]
Coordinates
chr1:-:18681932..18685652
Molecular Weight (calculated)
49593.7 Da
IEP (calculated)
8.433
GRAVY (calculated)
0.369
Length
432 amino acids
Sequence
(BLAST)
(BLAST)
001: MAETVHSPIV TYASMLSLLA FCPPFVILLW YTMVHQDGSV TQTFGFFWEN GVQGLINIWP RPTLIAWKII FCYGAFEAIL QLLLPGKRVE GPISPAGNRP
101: VYKANGLAAY FVTLATYLGL WWFGIFNPAI VYDHLGEIFS ALIFGSFIFC VLLYIKGHVA PSSSDSGSCG NLIIDFYWGM ELYPRIGKSF DIKVFTNCRF
201: GMMSWAVLAV TYCIKQYEIN GKVSDSMLVN TILMLVYVTK FFWWEAGYWN TMDIAHDRAG FYICWGCLVW VPSVYTSPGM YLVNHPVELG TQLAIYILVA
301: GILCIYINYD CDRQRQEFRR TNGKCLVWGR APSKIVASYT TTSGETKTSL LLTSGWWGLA RHFHYVPEIL SAFFWTVPAL FDNFLAYFYV IFLTLLLFDR
401: AKRDDDRCRS KYGKYWKLYC EKVKYRIIPG IY
101: VYKANGLAAY FVTLATYLGL WWFGIFNPAI VYDHLGEIFS ALIFGSFIFC VLLYIKGHVA PSSSDSGSCG NLIIDFYWGM ELYPRIGKSF DIKVFTNCRF
201: GMMSWAVLAV TYCIKQYEIN GKVSDSMLVN TILMLVYVTK FFWWEAGYWN TMDIAHDRAG FYICWGCLVW VPSVYTSPGM YLVNHPVELG TQLAIYILVA
301: GILCIYINYD CDRQRQEFRR TNGKCLVWGR APSKIVASYT TTSGETKTSL LLTSGWWGLA RHFHYVPEIL SAFFWTVPAL FDNFLAYFYV IFLTLLLFDR
401: AKRDDDRCRS KYGKYWKLYC EKVKYRIIPG IY
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.