Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 5
- vacuole 4
- plasma membrane 6
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX67551 | Canola | endoplasmic reticulum, extracellular | 37.67 | 95.21 |
| CDY70397 | Canola | endoplasmic reticulum, plasma membrane | 92.68 | 92.68 |
| CDX67552 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 56.91 | 90.91 |
| Bra019638.1-P | Field mustard | plasma membrane | 86.18 | 89.58 |
| CDY13326 | Canola | plasma membrane | 55.83 | 89.18 |
| CDX76247 | Canola | plasma membrane | 85.37 | 88.73 |
| CDY66282 | Canola | plasma membrane | 88.08 | 88.32 |
| KRH32646 | Soybean | plasma membrane | 58.81 | 84.77 |
| KRH20023 | Soybean | endoplasmic reticulum, plasma membrane | 80.49 | 79.41 |
| VIT_08s0007g03930.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 75.61 | 76.02 |
| PGSC0003DMT400007043 | Potato | endoplasmic reticulum | 75.88 | 75.88 |
| Solyc09g009040.2.1 | Tomato | plasma membrane | 75.34 | 75.34 |
| GSMUA_Achr3P22830_001 | Banana | plasma membrane | 72.09 | 70.18 |
| EER96347 | Sorghum | plasma membrane | 70.19 | 70.0 |
| Os09t0565600-01 | Rice | plasma membrane | 69.65 | 69.65 |
| TraesCS1D01G423500.1 | Wheat | plasma membrane | 69.65 | 68.35 |
| TraesCS1A01G416000.1 | Wheat | plasma membrane | 68.56 | 68.01 |
| Os01t0354200-01 | Rice | endoplasmic reticulum, plasma membrane | 57.99 | 66.46 |
| TraesCS1B01G446300.1 | Wheat | plasma membrane | 69.38 | 66.32 |
| HORVU1Hr1G091090.9 | Barley | mitochondrion, peroxisome, plasma membrane, plastid | 68.02 | 58.24 |
| Zm00001d006889_P004 | Maize | plastid | 63.14 | 53.44 |
| AT1G50430.1 | Thale cress | plasma membrane | 26.56 | 22.69 |
Protein Annotations
| MapMan:5.5.1.3 | EntrezGene:824460 | ProteinID:AAF82283.1 | ProteinID:AAF82768.1 | ProteinID:AEE79013.1 | EMBL:AF256535 |
| EMBL:AF257178 | EMBL:AK227189 | ArrayExpress:AT3G52940 | EnsemblPlantsGene:AT3G52940 | RefSeq:AT3G52940 | TAIR:AT3G52940 |
| RefSeq:AT3G52940-TAIR-G | EnsemblPlants:AT3G52940.1 | TAIR:AT3G52940.1 | EMBL:AY064964 | EMBL:AY133650 | ProteinID:CAC01296.1 |
| InterPro:Ergosterol_biosynth_ERG4_ERG24 | Symbol:FK | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0006629 |
| GO:GO:0006694 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008202 | GO:GO:0009058 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016126 | GO:GO:0016491 | GO:GO:0016628 | GO:GO:0030176 | GO:GO:0050613 |
| GO:GO:0050661 | GO:GO:0055114 | RefSeq:NP_566975.1 | PFAM:PF01222 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | ScanProsite:PS01017 | ScanProsite:PS01018 |
| PANTHER:PTHR21257 | PANTHER:PTHR21257:SF47 | UniProt:Q0WUH0 | UniProt:Q9LDR4 | InterPro:Sterol_reductase_CS | TMHMM:TMhelix |
| UniParc:UPI0000000F6B | SEG:seg | : | : | : | : |
Description
FKDelta(14)-sterol reductase [Source:UniProtKB/Swiss-Prot;Acc:Q9LDR4]
Coordinates
chr3:-:19630077..19633328
Molecular Weight (calculated)
41915.6 Da
IEP (calculated)
8.942
GRAVY (calculated)
0.653
Length
369 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLDMDLGVL LPSLQSVYVL VFYFVYLAVA GEILPGKVIR GVLLSDGSQL RYRCNGLLAL ILLVAILGIC AKLGIVSPLV VADRGLELLS ATFIFCVLVT
101: LALYVTGRSS SNKGSSLKPH VSGNLVHDWW FGIQLNPQFM SIDLKFFFVR AGMMGWLLIN LSILAKSVQD GSLSQSMILY QIFCALYILD YFVHEEYMTS
201: TWDIIAERLG FMLVFGDLLW IPFTFSIQGW WLLHNKVELT VPAIVVNCLV FLIGYMVFRG ANKQKHIFKK NPKTPIWGKP PVVVGGKLLV SGYWGIARHC
301: NYLGDLMLAL SFSLPCGISS PVPYFYPIYL LILLIWRERR DEVRCAEKYK EIWAEYLRLV PWRILPYVY
101: LALYVTGRSS SNKGSSLKPH VSGNLVHDWW FGIQLNPQFM SIDLKFFFVR AGMMGWLLIN LSILAKSVQD GSLSQSMILY QIFCALYILD YFVHEEYMTS
201: TWDIIAERLG FMLVFGDLLW IPFTFSIQGW WLLHNKVELT VPAIVVNCLV FLIGYMVFRG ANKQKHIFKK NPKTPIWGKP PVVVGGKLLV SGYWGIARHC
301: NYLGDLMLAL SFSLPCGISS PVPYFYPIYL LILLIWRERR DEVRCAEKYK EIWAEYLRLV PWRILPYVY
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.