Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX67551 | Canola | endoplasmic reticulum, extracellular | 38.48 | 97.26 |
| CDX67552 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 59.35 | 94.81 |
| CDY13326 | Canola | plasma membrane | 59.35 | 94.81 |
| AT3G52940.1 | Thale cress | plasma membrane | 92.68 | 92.68 |
| CDY66282 | Canola | plasma membrane | 89.43 | 89.67 |
| CDX76247 | Canola | plasma membrane | 85.91 | 89.3 |
| KRH32646 | Soybean | plasma membrane | 58.81 | 84.77 |
| KRH20023 | Soybean | endoplasmic reticulum, plasma membrane | 79.67 | 78.61 |
| VIT_08s0007g03930.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 75.07 | 75.48 |
| PGSC0003DMT400007043 | Potato | endoplasmic reticulum | 75.34 | 75.34 |
| Solyc09g009040.2.1 | Tomato | plasma membrane | 74.8 | 74.8 |
| GSMUA_Achr3P22830_001 | Banana | plasma membrane | 72.09 | 70.18 |
| Os09t0565600-01 | Rice | plasma membrane | 68.83 | 68.83 |
| EER96347 | Sorghum | plasma membrane | 68.83 | 68.65 |
| TraesCS1D01G423500.1 | Wheat | plasma membrane | 68.83 | 67.55 |
| TraesCS1A01G416000.1 | Wheat | plasma membrane | 67.75 | 67.2 |
| Os01t0354200-01 | Rice | endoplasmic reticulum, plasma membrane | 57.99 | 66.46 |
| TraesCS1B01G446300.1 | Wheat | plasma membrane | 68.56 | 65.54 |
| HORVU1Hr1G091090.9 | Barley | mitochondrion, peroxisome, plasma membrane, plastid | 67.75 | 58.0 |
| Zm00001d006889_P004 | Maize | plastid | 62.06 | 52.52 |
| CDY45061 | Canola | plasma membrane | 27.1 | 23.15 |
| CDY03603 | Canola | plasma membrane | 27.1 | 23.15 |
| CDY29319 | Canola | plasma membrane | 22.76 | 20.19 |
| CDY07286 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 11.92 | 14.24 |
| CDY07287 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 5.42 | 13.89 |
Protein Annotations
| MapMan:5.5.1.3 | GO:A0A078JXP0 | UniProt:A0A078JXP0 | EnsemblPlants:CDY70397 | ProteinID:CDY70397 | ProteinID:CDY70397.1 |
| InterPro:Ergosterol_biosynth_ERG4_ERG24 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016628 | GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00098479001 | PFAM:PF01222 |
| ScanProsite:PS01017 | ScanProsite:PS01018 | PANTHER:PTHR21257 | PANTHER:PTHR21257:SF47 | InterPro:Sterol_reductase_CS | TMHMM:TMhelix |
| UniParc:UPI0004EEDAD5 | SEG:seg | : | : | : | : |
Description
BnaCnng68190DBnaCnng68190D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JXP0]
Coordinates
chrLK041973:+:1..2871
Molecular Weight (calculated)
41886.2 Da
IEP (calculated)
9.091
GRAVY (calculated)
0.599
Length
369 amino acids
Sequence
(BLAST)
(BLAST)
001: VLLRSLIPSL QSVYVLVSYF VYLAVAGELL PGKVIRGVVL SDGSQLRYRC NGLFALTLLV AILGISAKLG IVSPLVVADR GLELLSATFI FCVLVTLVLY
101: ISGRSSSDKT SSLKPHVSGN LVHDWWFGIQ LNPQFLSIDL KFFFVRAGMM GWLLINLSIL AKSVQDDSLS QSMILYQIFC ALYILDYFVH EEYMTSTWDI
201: IAERLGFMLV FGDLLWIPFT FSIQACNCGW WLLHNKVQLT VPAIVANCFV FLIGYMVFRG ANKQKHIFKK NPKTPIWGKP PVVVGGKLLA SGYWGIARHC
301: NYLGDLMLAL SFSLPCGISS PVPYFYPIYL LILLIWRERR DEVRCAEKYK EIWAEYLRLV PYRILPYVY
101: ISGRSSSDKT SSLKPHVSGN LVHDWWFGIQ LNPQFLSIDL KFFFVRAGMM GWLLINLSIL AKSVQDDSLS QSMILYQIFC ALYILDYFVH EEYMTSTWDI
201: IAERLGFMLV FGDLLWIPFT FSIQACNCGW WLLHNKVQLT VPAIVANCFV FLIGYMVFRG ANKQKHIFKK NPKTPIWGKP PVVVGGKLLA SGYWGIARHC
301: NYLGDLMLAL SFSLPCGISS PVPYFYPIYL LILLIWRERR DEVRCAEKYK EIWAEYLRLV PYRILPYVY
001: MLLDMDLGVL LPSLQSVYVL VFYFVYLAVA GEILPGKVIR GVLLSDGSQL RYRCNGLLAL ILLVAILGIC AKLGIVSPLV VADRGLELLS ATFIFCVLVT
101: LALYVTGRSS SNKGSSLKPH VSGNLVHDWW FGIQLNPQFM SIDLKFFFVR AGMMGWLLIN LSILAKSVQD GSLSQSMILY QIFCALYILD YFVHEEYMTS
201: TWDIIAERLG FMLVFGDLLW IPFTFSIQGW WLLHNKVELT VPAIVVNCLV FLIGYMVFRG ANKQKHIFKK NPKTPIWGKP PVVVGGKLLV SGYWGIARHC
301: NYLGDLMLAL SFSLPCGISS PVPYFYPIYL LILLIWRERR DEVRCAEKYK EIWAEYLRLV PWRILPYVY
101: LALYVTGRSS SNKGSSLKPH VSGNLVHDWW FGIQLNPQFM SIDLKFFFVR AGMMGWLLIN LSILAKSVQD GSLSQSMILY QIFCALYILD YFVHEEYMTS
201: TWDIIAERLG FMLVFGDLLW IPFTFSIQGW WLLHNKVELT VPAIVVNCLV FLIGYMVFRG ANKQKHIFKK NPKTPIWGKP PVVVGGKLLV SGYWGIARHC
301: NYLGDLMLAL SFSLPCGISS PVPYFYPIYL LILLIWRERR DEVRCAEKYK EIWAEYLRLV PWRILPYVY
Arabidopsis Description
FKDelta(14)-sterol reductase [Source:UniProtKB/Swiss-Prot;Acc:Q9LDR4]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.