Factsheet for PGSC0003DMT400007043

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

plastid 1
cytosol 1
extracellular 4
endoplasmic reticulum 7
vacuole 4
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g009040.2.1	Tomato	plasma membrane	98.1	98.1
CDX67551	Canola	endoplasmic reticulum, extracellular	33.33	84.25
KRH32646	Soybean	plasma membrane	56.64	81.64
VIT_08s0007g03930.t01	Wine grape	endoplasmic reticulum, plasma membrane	80.22	80.65
KRH20023	Soybean	endoplasmic reticulum, plasma membrane	81.57	80.48
AT3G52940.1	Thale cress	plasma membrane	75.88	75.88
CDY70397	Canola	endoplasmic reticulum, plasma membrane	75.34	75.34
GSMUA_Achr3P22830_001	Banana	plasma membrane	76.42	74.41
CDY66282	Canola	plasma membrane	73.71	73.91
Bra019638.1-P	Field mustard	plasma membrane	70.73	73.52
CDX76247	Canola	plasma membrane	70.46	73.24
EER96347	Sorghum	plasma membrane	72.63	72.43
Os09t0565600-01	Rice	plasma membrane	71.82	71.82
CDX67552	Canola	endoplasmic reticulum, plasma membrane, vacuole	44.72	71.43
TraesCS1D01G423500.1	Wheat	plasma membrane	72.63	71.28
TraesCS1A01G416000.1	Wheat	plasma membrane	71.54	70.97
Os01t0354200-01	Rice	endoplasmic reticulum, plasma membrane	61.79	70.81
CDY13326	Canola	plasma membrane	43.63	69.7
TraesCS1B01G446300.1	Wheat	plasma membrane	72.36	69.17
HORVU1Hr1G091090.9	Barley	mitochondrion, peroxisome, plasma membrane, plastid	72.09	61.72
Zm00001d006889_P004	Maize	plastid	64.23	54.36
PGSC0003DMT400015184	Potato	plasma membrane	28.46	24.19
PGSC0003DMT400038174	Potato	mitochondrion, plasma membrane	27.64	23.5

Protein Annotations

Gene3D:1.20.120.1630	EntrezGene:102595277	MapMan:5.5.1.3	InterPro:Ergosterol_biosynth_ERG4_ERG24	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016628
GO:GO:0050613	GO:GO:0055114	UniProt:M0ZSD2	PFAM:PF01222	EnsemblPlantsGene:PGSC0003DMG400002720	PGSC:PGSC0003DMG400002720
EnsemblPlants:PGSC0003DMT400007043	ScanProsite:PS01018	PANTHER:PTHR21257	PANTHER:PTHR21257:SF47	InterPro:Sterol_reductase_CS	TMHMM:TMhelix
UniParc:UPI000295A8A3	RefSeq:XP_006341170.1	SEG:seg	:	:	:

Description

Delta14-sterol reductase [Source:PGSC_GENE;Acc:PGSC0003DMG400002720]

Coordinates

chr9:-:3919011..3927016

Molecular Weight (calculated)

41747.9 Da

IEP (calculated)

8.894

GRAVY (calculated)

0.570

Length

369 amino acids

Sequence
(BLAST)

001: MDLNYLFISL TPSWTSVAML IGYFLYLATV GSILPGKLVP GATLSDGTRL HYRCNGLLSL LLLVLLLGVG SQMNLVSPTA IADRGLELLS TTFIFSVLVT
101: LMLYLVGLNS RAKSSSLKPH VSGNLIHDWW FGIQLNPEFM GIDLKFFFVR AGMMGWLLIN LSVLAKCVIE AKLSQSMILY QLFCGLYILD YFFYEEFMTS
201: TWDIIAERLG FMLVFGDLVF IPFTFSIQGW WLLSNNVELT TAAIIANCLV FLIGYSVFRG ANKQKHVFKK DPKAPIWGSP PKVIGGKLLA SGYWGIARHC
301: NYLGDLLLAS SFSLPCGISS VVPYFYPIYL LILLIWRERR DEARCAEKYK DVWAEYRKLV PYRILPYVY

Best Arabidopsis Sequence Match ( AT3G52940.1 )
(BLAST)

001: MLLDMDLGVL LPSLQSVYVL VFYFVYLAVA GEILPGKVIR GVLLSDGSQL RYRCNGLLAL ILLVAILGIC AKLGIVSPLV VADRGLELLS ATFIFCVLVT
101: LALYVTGRSS SNKGSSLKPH VSGNLVHDWW FGIQLNPQFM SIDLKFFFVR AGMMGWLLIN LSILAKSVQD GSLSQSMILY QIFCALYILD YFVHEEYMTS
201: TWDIIAERLG FMLVFGDLLW IPFTFSIQGW WLLHNKVELT VPAIVVNCLV FLIGYMVFRG ANKQKHIFKK NPKTPIWGKP PVVVGGKLLV SGYWGIARHC
301: NYLGDLMLAL SFSLPCGISS PVPYFYPIYL LILLIWRERR DEVRCAEKYK EIWAEYLRLV PWRILPYVY

Arabidopsis Description

FKDelta(14)-sterol reductase [Source:UniProtKB/Swiss-Prot;Acc:Q9LDR4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.