Factsheet for Bra019638.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 5
plasma membrane 8
golgi 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX76247	Canola	plasma membrane	98.59	98.59
AT3G52940.1	Thale cress	plasma membrane	89.58	86.18
KRH32646	Soybean	plasma membrane	55.77	77.34
KRH20023	Soybean	endoplasmic reticulum, plasma membrane	76.62	72.73
PGSC0003DMT400007043	Potato	endoplasmic reticulum	73.52	70.73
VIT_08s0007g03930.t01	Wine grape	endoplasmic reticulum, plasma membrane	72.68	70.3
Solyc09g009040.2.1	Tomato	plasma membrane	72.68	69.92
GSMUA_Achr3P22830_001	Banana	plasma membrane	70.14	65.7
EER96347	Sorghum	plasma membrane	67.89	65.14
Os09t0565600-01	Rice	plasma membrane	67.04	64.5
TraesCS1D01G423500.1	Wheat	plasma membrane	67.04	63.3
TraesCS1A01G416000.1	Wheat	plasma membrane	65.92	62.9
Os01t0354200-01	Rice	endoplasmic reticulum, plasma membrane	56.34	62.11
TraesCS1B01G446300.1	Wheat	plasma membrane	66.76	61.4
HORVU1Hr1G091090.9	Barley	mitochondrion, peroxisome, plasma membrane, plastid	65.92	54.29
Zm00001d006889_P004	Maize	plastid	61.41	50.0
Bra014252.1-P	Field mustard	plasma membrane	26.48	21.76
Bra030492.1-P	Field mustard	extracellular, plasma membrane	7.61	19.57
Bra041028.1-P	Field mustard	plasma membrane	16.62	17.25

Protein Annotations

MapMan:5.5.1.3	EnsemblPlantsGene:Bra019638	EnsemblPlants:Bra019638.1	EnsemblPlants:Bra019638.1-P	InterPro:Ergosterol_biosynth_ERG4_ERG24	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021
GO:GO:0016628	GO:GO:0050613	GO:GO:0055114	UniProt:M4DSZ5	PFAM:PF01222	ScanProsite:PS01017
ScanProsite:PS01018	PANTHER:PTHR21257	PANTHER:PTHR21257:SF47	InterPro:Sterol_reductase_CS	TMHMM:TMhelix	UniParc:UPI000253E73E
SEG:seg	:	:	:	:	:

Description

AT3G52940 (E=5e-118) FK, HYD2, ELL1 | FK (FACKEL); delta14-sterol reductase

Coordinates

chrA06:-:5368858..5371494

Molecular Weight (calculated)

40477.3 Da

IEP (calculated)

9.208

GRAVY (calculated)

0.495

Length

355 amino acids

Sequence
(BLAST)

001: MDPRLLIPSS QSVCVLVFYF VYLAVAGEIL PGKVIRGVVL SDGSQLRYRC NGLFALSLLV AILGISAKLG VLSPLVVADR GLELLSATFI FCVLVTLVLY
101: ITGRSSSDKS SSLKPHVSGY LVHDWWFGIQ LNPQFIGIDL KFFFVRAGMM GWLLINLSIL AKCVQDGSLS QSMILYQIFC ALYILDYFVH EEYMTSTWDI
201: IAERLGFMLV FGDLLWIPFT FSIQAWMVAF AQQSRTNCSW YMVFRGANKQ KHIFKKNPKT PIWGKPPVVV GGKLLASGYW GIARHCNYLG DLMLALSFSL
301: PCGISSPVPY FYPIYLLILL IWRERRDEER CAEKYKEIWP KYLRLVPYRI LPYVY

Best Arabidopsis Sequence Match ( AT3G52940.1 )
(BLAST)

001: MLLDMDLGVL LPSLQSVYVL VFYFVYLAVA GEILPGKVIR GVLLSDGSQL RYRCNGLLAL ILLVAILGIC AKLGIVSPLV VADRGLELLS ATFIFCVLVT
101: LALYVTGRSS SNKGSSLKPH VSGNLVHDWW FGIQLNPQFM SIDLKFFFVR AGMMGWLLIN LSILAKSVQD GSLSQSMILY QIFCALYILD YFVHEEYMTS
201: TWDIIAERLG FMLVFGDLLW IPFTFSIQGW WLLHNKVELT VPAIVVNCLV FLIGYMVFRG ANKQKHIFKK NPKTPIWGKP PVVVGGKLLV SGYWGIARHC
301: NYLGDLMLAL SFSLPCGISS PVPYFYPIYL LILLIWRERR DEVRCAEKYK EIWAEYLRLV PWRILPYVY

Arabidopsis Description

FKDelta(14)-sterol reductase [Source:UniProtKB/Swiss-Prot;Acc:Q9LDR4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.