Factsheet for Zm00001d006889_P004

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
endoplasmic reticulum 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER96347	Sorghum	plasma membrane	69.04	81.35
CDX67551	Canola	endoplasmic reticulum, extracellular	25.92	77.4
KRH32646	Soybean	plasma membrane	44.04	75.0
Os09t0565600-01	Rice	plasma membrane	62.39	73.71
TraesCS1D01G423500.1	Wheat	plasma membrane	63.07	73.14
TraesCS1A01G416000.1	Wheat	plasma membrane	62.16	72.85
Os01t0354200-01	Rice	endoplasmic reticulum, plasma membrane	52.75	71.43
TraesCS1B01G446300.1	Wheat	plasma membrane	62.39	70.47
GSMUA_Achr3P22830_001	Banana	plasma membrane	57.57	66.23
PGSC0003DMT400007043	Potato	endoplasmic reticulum	54.36	64.23
HORVU1Hr1G091090.9	Barley	mitochondrion, peroxisome, plasma membrane, plastid	63.3	64.04
Solyc09g009040.2.1	Tomato	plasma membrane	54.13	63.96
AT3G52940.1	Thale cress	plasma membrane	53.44	63.14
KRH20023	Soybean	endoplasmic reticulum, plasma membrane	54.13	63.1
VIT_08s0007g03930.t01	Wine grape	endoplasmic reticulum, plasma membrane	52.75	62.67
CDY70397	Canola	endoplasmic reticulum, plasma membrane	52.52	62.06
CDX76247	Canola	plasma membrane	50.23	61.69
Bra019638.1-P	Field mustard	plasma membrane	50.0	61.41
CDY66282	Canola	plasma membrane	51.61	61.14
CDX67552	Canola	endoplasmic reticulum, plasma membrane, vacuole	27.52	51.95
CDY13326	Canola	plasma membrane	26.61	50.22
Zm00001d016463_P001	Maize	plastid	23.17	21.77

Protein Annotations

Gene3D:1.20.120.1630	EntrezGene:100281352	MapMan:5.5.1.3	UniProt:A0A1D6F1V6	InterPro:Ergosterol_biosynth_ERG4_ERG24	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021
GO:GO:0050613	GO:GO:0055114	ProteinID:ONM25416.1	PFAM:PF01222	PANTHER:PTHR21257	PANTHER:PTHR21257:SF47
TMHMM:TMhelix	UniParc:UPI000843EB97	EnsemblPlantsGene:Zm00001d006889	EnsemblPlants:Zm00001d006889_P004	EnsemblPlants:Zm00001d006889_T004	SEG:seg

Description

Delta(14)-sterol reductase

Coordinates

chr2:+:218597482..218602040

Molecular Weight (calculated)

49067.0 Da

IEP (calculated)

9.501

GRAVY (calculated)

0.506

Length

436 amino acids

Sequence
(BLAST)

001: MEAAAAVLPT LVPSGSAVVS RRSSLATVVP LVCCGLLHMD RSLCTCVLAL CCAGGGAPRL PRVSRRRWSH PPREARRRSP TPGLLSPPLS LQRYLLLPLF
101: PESSGQPAEL FDRLPLILVW LAGLLSLLLL LGLSAFGVYM GWMSPTVVAD MGLELLSVTF IFSVIVSFAL YIAGIKSGHK SSSLRPHVSG SFMQDWWFGV
201: QLNPHFMEVD LKFFFVRAGM MAWLFINLSL FAKSYFAGSA NLSVILYQFF CAWYIIDYFV HEEFMTSTWD IIAERLGFML VFGDLVFIPF TFTIQGWWLL
301: KNKVELSLLS GLANLCIFLI GYLVFRGANK QKHVFKKDPK APIWGKPPKV VGGKLLASGY WGIARHCNYL GDLLLALSFS LPCGVSSVVP YFYPTYLLIL
401: LVLRERRDEA RCSQKYREIW AEYCKLVPWR ILPYVY

Best Arabidopsis Sequence Match ( AT3G52940.1 )
(BLAST)

001: MLLDMDLGVL LPSLQSVYVL VFYFVYLAVA GEILPGKVIR GVLLSDGSQL RYRCNGLLAL ILLVAILGIC AKLGIVSPLV VADRGLELLS ATFIFCVLVT
101: LALYVTGRSS SNKGSSLKPH VSGNLVHDWW FGIQLNPQFM SIDLKFFFVR AGMMGWLLIN LSILAKSVQD GSLSQSMILY QIFCALYILD YFVHEEYMTS
201: TWDIIAERLG FMLVFGDLLW IPFTFSIQGW WLLHNKVELT VPAIVVNCLV FLIGYMVFRG ANKQKHIFKK NPKTPIWGKP PVVVGGKLLV SGYWGIARHC
301: NYLGDLMLAL SFSLPCGISS PVPYFYPIYL LILLIWRERR DEVRCAEKYK EIWAEYLRLV PWRILPYVY

Arabidopsis Description

FKDelta(14)-sterol reductase [Source:UniProtKB/Swiss-Prot;Acc:Q9LDR4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.