Factsheet for Solyc09g009040.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
cytosol 1
extracellular 3
endoplasmic reticulum 4
vacuole 3
plasma membrane 5
golgi 3
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	plastid
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	endoplasmic reticulum
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400007043	Potato	endoplasmic reticulum	98.1	98.1
CDX67551	Canola	endoplasmic reticulum, extracellular	33.6	84.93
KRH32646	Soybean	plasma membrane	56.37	81.25
KRH20023	Soybean	endoplasmic reticulum, plasma membrane	81.3	80.21
VIT_08s0007g03930.t01	Wine grape	endoplasmic reticulum, plasma membrane	79.67	80.11
AT3G52940.1	Thale cress	plasma membrane	75.34	75.34
CDY70397	Canola	endoplasmic reticulum, plasma membrane	74.8	74.8
GSMUA_Achr3P22830_001	Banana	plasma membrane	75.88	73.88
CDY66282	Canola	plasma membrane	72.9	73.1
Bra019638.1-P	Field mustard	plasma membrane	69.92	72.68
CDX76247	Canola	plasma membrane	69.65	72.39
EER96347	Sorghum	plasma membrane	72.09	71.89
Os09t0565600-01	Rice	plasma membrane	71.27	71.27
TraesCS1D01G423500.1	Wheat	plasma membrane	72.09	70.74
TraesCS1A01G416000.1	Wheat	plasma membrane	71.0	70.43
CDX67552	Canola	endoplasmic reticulum, plasma membrane, vacuole	43.9	70.13
Os01t0354200-01	Rice	endoplasmic reticulum, plasma membrane	60.7	69.57
TraesCS1B01G446300.1	Wheat	plasma membrane	72.36	69.17
CDY13326	Canola	plasma membrane	42.82	68.4
HORVU1Hr1G091090.9	Barley	mitochondrion, peroxisome, plasma membrane, plastid	71.54	61.25
Zm00001d006889_P004	Maize	plastid	63.96	54.13
Solyc06g074090.2.1	Tomato	nucleus	27.64	23.5
Solyc01g009310.2.1	Tomato	nucleus, plasma membrane	26.83	22.81

Protein Annotations

Gene3D:1.20.120.1630	MapMan:5.5.1.3	InterPro:Ergosterol_biosynth_ERG4_ERG24	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0016020	GO:GO:0016021	GO:GO:0016126	GO:GO:0016628
GO:GO:0030176	GO:GO:0050613	GO:GO:0055114	UniProt:K4CQT4	PFAM:PF01222	ScanProsite:PS01018
PANTHER:PTHR21257	PANTHER:PTHR21257:SF47	EnsemblPlantsGene:Solyc09g009040.2	EnsemblPlants:Solyc09g009040.2.1	InterPro:Sterol_reductase_CS	TMHMM:TMhelix
UniParc:UPI000276C2D9	SEG:seg	:	:	:	:

Description

Delta(14)-sterol reductase [Source:Projected from Arabidopsis thaliana (AT3G52940) UniProtKB/Swiss-Prot;Acc:Q9LDR4]

Coordinates

chr9:+:2385547..2393745

Molecular Weight (calculated)

41680.9 Da

IEP (calculated)

9.044

GRAVY (calculated)

0.557

Length

369 amino acids

Sequence
(BLAST)

001: MDLNNLFISL TPSWTSVSML IGFFLYLATV GSILPGKLVP GATLSDGTRL HYRCNGLLSL LLLVLLLGVG SQMNLVSPTA IADRGLELLS TTLIFSVLVT
101: LMLYLVGLNS RAKSSSLKPH VSGNLIHDWW FGIQLNPEFM GIDLKFFFVR AGMMGWLLIN LSVLAKCVVE AKLSQSMILY QLFCGLYILD YFFYEEFMTS
201: TWDIIAERLG YMLVFGDLVF IPFTFSIQGW WLLSNKVELT TAAIIANCLV FLIGYSVFRG ANKQKHVFKK DPKAPIWGSP PKVIGGKLLA SGYWGIARHC
301: NYLGDLLLAS SFSLPCGISS VVPYFYPIYL LILLIWRERR DEARCAEKYK DVWAEYRKLV PYRILPYVY

Best Arabidopsis Sequence Match ( AT3G52940.1 )
(BLAST)

001: MLLDMDLGVL LPSLQSVYVL VFYFVYLAVA GEILPGKVIR GVLLSDGSQL RYRCNGLLAL ILLVAILGIC AKLGIVSPLV VADRGLELLS ATFIFCVLVT
101: LALYVTGRSS SNKGSSLKPH VSGNLVHDWW FGIQLNPQFM SIDLKFFFVR AGMMGWLLIN LSILAKSVQD GSLSQSMILY QIFCALYILD YFVHEEYMTS
201: TWDIIAERLG FMLVFGDLLW IPFTFSIQGW WLLHNKVELT VPAIVVNCLV FLIGYMVFRG ANKQKHIFKK NPKTPIWGKP PVVVGGKLLV SGYWGIARHC
301: NYLGDLMLAL SFSLPCGISS PVPYFYPIYL LILLIWRERR DEVRCAEKYK EIWAEYLRLV PWRILPYVY

Arabidopsis Description

FKDelta(14)-sterol reductase [Source:UniProtKB/Swiss-Prot;Acc:Q9LDR4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.