Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 6
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G423500.1 | Wheat | plasma membrane | 97.04 | 96.01 |
| TraesCS1B01G446300.1 | Wheat | plasma membrane | 96.51 | 93.01 |
| EER96347 | Sorghum | plasma membrane | 85.75 | 86.22 |
| Os09t0565600-01 | Rice | plasma membrane | 85.48 | 86.18 |
| CDX67551 | Canola | endoplasmic reticulum, extracellular | 32.26 | 82.19 |
| Os01t0354200-01 | Rice | endoplasmic reticulum, plasma membrane | 70.97 | 81.99 |
| HORVU1Hr1G091090.9 | Barley | mitochondrion, peroxisome, plasma membrane, plastid | 91.4 | 78.89 |
| KRH32646 | Soybean | plasma membrane | 50.81 | 73.83 |
| GSMUA_Achr3P22830_001 | Banana | plasma membrane | 75.0 | 73.61 |
| PGSC0003DMT400007043 | Potato | endoplasmic reticulum | 70.97 | 71.54 |
| Solyc09g009040.2.1 | Tomato | plasma membrane | 70.43 | 71.0 |
| VIT_08s0007g03930.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 68.55 | 69.48 |
| KRH20023 | Soybean | endoplasmic reticulum, plasma membrane | 69.35 | 68.98 |
| AT3G52940.1 | Thale cress | plasma membrane | 68.01 | 68.56 |
| CDY70397 | Canola | endoplasmic reticulum, plasma membrane | 67.2 | 67.75 |
| CDX76247 | Canola | plasma membrane | 63.17 | 66.2 |
| CDY66282 | Canola | plasma membrane | 65.32 | 66.03 |
| Bra019638.1-P | Field mustard | plasma membrane | 62.9 | 65.92 |
| Zm00001d006889_P004 | Maize | plastid | 72.85 | 62.16 |
| CDX67552 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 37.63 | 60.61 |
| CDY13326 | Canola | plasma membrane | 36.02 | 58.01 |
| TraesCS3A01G488600.1 | Wheat | plasma membrane | 27.69 | 22.69 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G416000.1 | EnsemblPlantsGene:TraesCS1A01G416000 | Gene3D:1.20.120.1630 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016628 | GO:GO:0050613 | GO:GO:0055114 |
| InterPro:Ergosterol_biosynth_ERG4_ERG24 | InterPro:Sterol_reductase_CS | PANTHER:PTHR21257 | PANTHER:PTHR21257:SF47 | PFAM:PF01222 | ScanProsite:PS01018 |
| SEG:seg | TMHMM:TMhelix | MapMan:5.5.1.3 | : | : | : |
Description
No Description!
Coordinates
chr1A:-:574640879..574644327
Molecular Weight (calculated)
41913.8 Da
IEP (calculated)
9.397
GRAVY (calculated)
0.539
Length
372 amino acids
Sequence
(BLAST)
(BLAST)
001: MDAAAAAGVL AALAPSWSAA VVLASYLAYL AAAGALLPRK LVAGAVLPDS SRLHYRCNGL LSLLLLLGLS ALGVYTGWMT PTVVADRGLE LLSTTFTFSV
101: IVSFLLYYTG LRSRHQSSSL KPHATGSFIE DWWFGVQLNP HFMGVDLKFF FIRAGMMAWL FINLSLLAKS YLAGSVNRAV ILYQFFCGWY IIDYFIHEEF
201: MTSTWDIIAE RLGFMLVFGD LVFVPFTFTI QGWWLLRNKV ELPLLASVAN CIIFLIGYLV FRGANKQKHL FKKDPKAPIW GKPPKVVGGK LLVSGYWGIA
301: RHCNYLGDLL LALSFSLPCG ASSVIPYFYP TYLLILLIWR ERRDEARCSE KYKDIWAEYC KLVPWRILPY VY
101: IVSFLLYYTG LRSRHQSSSL KPHATGSFIE DWWFGVQLNP HFMGVDLKFF FIRAGMMAWL FINLSLLAKS YLAGSVNRAV ILYQFFCGWY IIDYFIHEEF
201: MTSTWDIIAE RLGFMLVFGD LVFVPFTFTI QGWWLLRNKV ELPLLASVAN CIIFLIGYLV FRGANKQKHL FKKDPKAPIW GKPPKVVGGK LLVSGYWGIA
301: RHCNYLGDLL LALSFSLPCG ASSVIPYFYP TYLLILLIWR ERRDEARCSE KYKDIWAEYC KLVPWRILPY VY
001: MLLDMDLGVL LPSLQSVYVL VFYFVYLAVA GEILPGKVIR GVLLSDGSQL RYRCNGLLAL ILLVAILGIC AKLGIVSPLV VADRGLELLS ATFIFCVLVT
101: LALYVTGRSS SNKGSSLKPH VSGNLVHDWW FGIQLNPQFM SIDLKFFFVR AGMMGWLLIN LSILAKSVQD GSLSQSMILY QIFCALYILD YFVHEEYMTS
201: TWDIIAERLG FMLVFGDLLW IPFTFSIQGW WLLHNKVELT VPAIVVNCLV FLIGYMVFRG ANKQKHIFKK NPKTPIWGKP PVVVGGKLLV SGYWGIARHC
301: NYLGDLMLAL SFSLPCGISS PVPYFYPIYL LILLIWRERR DEVRCAEKYK EIWAEYLRLV PWRILPYVY
101: LALYVTGRSS SNKGSSLKPH VSGNLVHDWW FGIQLNPQFM SIDLKFFFVR AGMMGWLLIN LSILAKSVQD GSLSQSMILY QIFCALYILD YFVHEEYMTS
201: TWDIIAERLG FMLVFGDLLW IPFTFSIQGW WLLHNKVELT VPAIVVNCLV FLIGYMVFRG ANKQKHIFKK NPKTPIWGKP PVVVGGKLLV SGYWGIARHC
301: NYLGDLMLAL SFSLPCGISS PVPYFYPIYL LILLIWRERR DEVRCAEKYK EIWAEYLRLV PWRILPYVY
Arabidopsis Description
FKDelta(14)-sterol reductase [Source:UniProtKB/Swiss-Prot;Acc:Q9LDR4]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.