Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 5
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G416000.1 | Wheat | plasma membrane | 96.01 | 97.04 |
| TraesCS1B01G446300.1 | Wheat | plasma membrane | 97.87 | 95.34 |
| EER96347 | Sorghum | plasma membrane | 85.9 | 87.3 |
| Os09t0565600-01 | Rice | plasma membrane | 85.37 | 86.99 |
| Os01t0354200-01 | Rice | endoplasmic reticulum, plasma membrane | 71.01 | 82.92 |
| CDX67551 | Canola | endoplasmic reticulum, extracellular | 31.91 | 82.19 |
| HORVU1Hr1G091090.9 | Barley | mitochondrion, peroxisome, plasma membrane, plastid | 91.49 | 79.81 |
| GSMUA_Achr3P22830_001 | Banana | plasma membrane | 75.27 | 74.67 |
| KRH32646 | Soybean | plasma membrane | 50.53 | 74.22 |
| PGSC0003DMT400007043 | Potato | endoplasmic reticulum | 71.28 | 72.63 |
| Solyc09g009040.2.1 | Tomato | plasma membrane | 70.74 | 72.09 |
| KRH20023 | Soybean | endoplasmic reticulum, plasma membrane | 69.95 | 70.32 |
| VIT_08s0007g03930.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 68.62 | 70.3 |
| AT3G52940.1 | Thale cress | plasma membrane | 68.35 | 69.65 |
| CDY70397 | Canola | endoplasmic reticulum, plasma membrane | 67.55 | 68.83 |
| CDX76247 | Canola | plasma membrane | 63.56 | 67.32 |
| Bra019638.1-P | Field mustard | plasma membrane | 63.3 | 67.04 |
| CDY66282 | Canola | plasma membrane | 65.43 | 66.85 |
| Zm00001d006889_P004 | Maize | plastid | 73.14 | 63.07 |
| CDX67552 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 38.3 | 62.34 |
| CDY13326 | Canola | plasma membrane | 36.7 | 59.74 |
| TraesCS3D01G484700.1 | Wheat | golgi, peroxisome, plasma membrane | 27.13 | 22.37 |
Protein Annotations
| EnsemblPlants:TraesCS1D01G423500.1 | EnsemblPlantsGene:TraesCS1D01G423500 | Gene3D:1.20.120.1630 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016628 | GO:GO:0050613 | GO:GO:0055114 |
| InterPro:Ergosterol_biosynth_ERG4_ERG24 | InterPro:Sterol_reductase_CS | PANTHER:PTHR21257 | PANTHER:PTHR21257:SF47 | PFAM:PF01222 | ScanProsite:PS01018 |
| SEG:seg | TMHMM:TMhelix | MapMan:5.5.1.3 | : | : | : |
Description
No Description!
Coordinates
chr1D:-:478358721..478362484
Molecular Weight (calculated)
42275.3 Da
IEP (calculated)
9.036
GRAVY (calculated)
0.567
Length
376 amino acids
Sequence
(BLAST)
(BLAST)
001: MGMEDAAAAT ADVLAALAPS WSAAVVLVSY LAYLAAAGAL LPGKLVAGAV LPDSSRLHYR CNGLLSLLLL LGLSALGVYM GWMTPTVVAD RGLELLSTTF
101: IFSVIVSFLL YYTGLRSRHQ SSSLKPHATG SFIQDWWFGV QLNPHFMGVD LKFFFIRAGM MAWLFINLSL LAKSYLAGSV NRAVILYQFF CGWYIIDYFI
201: HEEFMTSTWD IIAERLGFML VFGDLVFIPF TFTIQGWWLL GNKVELPLLA SVANCIIFLI GYLVFRGANK QKHLFKKDPK APIWGKPPKV VGGKLLVSGY
301: WGIARHCNYL GDLLLALSFS LPCGASSVIP YFYPTYLLIL LIWRERRDEA RCSEKYKDIW AEYCKLVPWR ILPYVY
101: IFSVIVSFLL YYTGLRSRHQ SSSLKPHATG SFIQDWWFGV QLNPHFMGVD LKFFFIRAGM MAWLFINLSL LAKSYLAGSV NRAVILYQFF CGWYIIDYFI
201: HEEFMTSTWD IIAERLGFML VFGDLVFIPF TFTIQGWWLL GNKVELPLLA SVANCIIFLI GYLVFRGANK QKHLFKKDPK APIWGKPPKV VGGKLLVSGY
301: WGIARHCNYL GDLLLALSFS LPCGASSVIP YFYPTYLLIL LIWRERRDEA RCSEKYKDIW AEYCKLVPWR ILPYVY
001: MLLDMDLGVL LPSLQSVYVL VFYFVYLAVA GEILPGKVIR GVLLSDGSQL RYRCNGLLAL ILLVAILGIC AKLGIVSPLV VADRGLELLS ATFIFCVLVT
101: LALYVTGRSS SNKGSSLKPH VSGNLVHDWW FGIQLNPQFM SIDLKFFFVR AGMMGWLLIN LSILAKSVQD GSLSQSMILY QIFCALYILD YFVHEEYMTS
201: TWDIIAERLG FMLVFGDLLW IPFTFSIQGW WLLHNKVELT VPAIVVNCLV FLIGYMVFRG ANKQKHIFKK NPKTPIWGKP PVVVGGKLLV SGYWGIARHC
301: NYLGDLMLAL SFSLPCGISS PVPYFYPIYL LILLIWRERR DEVRCAEKYK EIWAEYLRLV PWRILPYVY
101: LALYVTGRSS SNKGSSLKPH VSGNLVHDWW FGIQLNPQFM SIDLKFFFVR AGMMGWLLIN LSILAKSVQD GSLSQSMILY QIFCALYILD YFVHEEYMTS
201: TWDIIAERLG FMLVFGDLLW IPFTFSIQGW WLLHNKVELT VPAIVVNCLV FLIGYMVFRG ANKQKHIFKK NPKTPIWGKP PVVVGGKLLV SGYWGIARHC
301: NYLGDLMLAL SFSLPCGISS PVPYFYPIYL LILLIWRERR DEVRCAEKYK EIWAEYLRLV PWRILPYVY
Arabidopsis Description
FKDelta(14)-sterol reductase [Source:UniProtKB/Swiss-Prot;Acc:Q9LDR4]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.