CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 7
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX76247	Canola	plasma membrane	90.76	94.08
CDX67552	Canola	endoplasmic reticulum, plasma membrane, vacuole	58.42	93.07
CDY13326	Canola	plasma membrane	57.07	90.91
CDY70397	Canola	endoplasmic reticulum, plasma membrane	89.67	89.43
AT3G52940.1	Thale cress	plasma membrane	88.32	88.08
CDX67551	Canola	endoplasmic reticulum, extracellular	33.97	85.62
KRH32646	Soybean	plasma membrane	56.25	80.86
KRH20023	Soybean	endoplasmic reticulum, plasma membrane	77.45	76.2
PGSC0003DMT400007043	Potato	endoplasmic reticulum	73.91	73.71
Solyc09g009040.2.1	Tomato	plasma membrane	73.1	72.9
VIT_08s0007g03930.t01	Wine grape	endoplasmic reticulum, plasma membrane	72.28	72.48
EER96347	Sorghum	plasma membrane	68.21	67.84
GSMUA_Achr3P22830_001	Banana	plasma membrane	69.57	67.55
Os09t0565600-01	Rice	plasma membrane	67.39	67.21
Os01t0354200-01	Rice	endoplasmic reticulum, plasma membrane	57.61	65.84
TraesCS1D01G423500.1	Wheat	plasma membrane	66.85	65.43
TraesCS1A01G416000.1	Wheat	plasma membrane	66.03	65.32
TraesCS1B01G446300.1	Wheat	plasma membrane	66.58	63.47
HORVU1Hr1G091090.9	Barley	mitochondrion, peroxisome, plasma membrane, plastid	65.76	56.15
Zm00001d006889_P004	Maize	plastid	61.14	51.61
CDY45061	Canola	plasma membrane	26.36	22.45
CDY03603	Canola	plasma membrane	26.36	22.45
CDY29319	Canola	plasma membrane	22.28	19.71
CDY07286	Canola	endoplasmic reticulum, plasma membrane, vacuole	11.96	14.24
CDY07287	Canola	endoplasmic reticulum, plasma membrane, vacuole	5.16	13.19

Protein Annotations

Gene3D:1.20.120.1630	MapMan:5.5.1.3	GO:A0A078JLP8	UniProt:A0A078JLP8	EnsemblPlants:CDY66282	ProteinID:CDY66282
ProteinID:CDY66282.1	InterPro:Ergosterol_biosynth_ERG4_ERG24	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016628	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00053317001
PFAM:PF01222	ScanProsite:PS01017	ScanProsite:PS01018	PANTHER:PTHR21257	PANTHER:PTHR21257:SF47	InterPro:Sterol_reductase_CS
TMHMM:TMhelix	UniParc:UPI0004EF4D94	SEG:seg	:	:	:

Description

BnaCnng50210DBnaCnng50210D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JLP8]

Coordinates

chrLK035182:+:319..3098

Molecular Weight (calculated)

41901.1 Da

IEP (calculated)

9.038

GRAVY (calculated)

0.541

Length

368 amino acids

Sequence
(BLAST)

001: MLEMDLRLLL PSLVPSSQSV YVLVFYFVYL AVAGEILPGK VIRGVVLSDG SQLRYRCNGL FALSLLVAIL GISAKLGVLS PLVVADRGLE LLSATFIFCV
101: LVTLVLYITG RTSSDKSSSL KPHVSGNLLH DWWFGIQLNP QFIGIDLKFF FVRAGMMGWL LINLSILAKS FQDGSLSQSM ILYQIFCALY ILDYFVHEEY
201: MTSTWDIIAE RLGFMLVFGD LLWIPFTFSI QAWMVAFAQQ SRTNTNCFVF LIGYMVFRGA NKQKHIFKKS PKTPIWGKPP VVVGGKLLAS GYWGIARHCN
301: YLGDLMLALS FSLPCGISSP VPYFYPIYLL ILLIWRERRD EERCAEKYKE IWAEYLRLVP YRILPYVY

Best Arabidopsis Sequence Match ( AT3G52940.1 )
(BLAST)

001: MLLDMDLGVL LPSLQSVYVL VFYFVYLAVA GEILPGKVIR GVLLSDGSQL RYRCNGLLAL ILLVAILGIC AKLGIVSPLV VADRGLELLS ATFIFCVLVT
101: LALYVTGRSS SNKGSSLKPH VSGNLVHDWW FGIQLNPQFM SIDLKFFFVR AGMMGWLLIN LSILAKSVQD GSLSQSMILY QIFCALYILD YFVHEEYMTS
201: TWDIIAERLG FMLVFGDLLW IPFTFSIQGW WLLHNKVELT VPAIVVNCLV FLIGYMVFRG ANKQKHIFKK NPKTPIWGKP PVVVGGKLLV SGYWGIARHC
301: NYLGDLMLAL SFSLPCGISS PVPYFYPIYL LILLIWRERR DEVRCAEKYK EIWAEYLRLV PWRILPYVY

Arabidopsis Description

FKDelta(14)-sterol reductase [Source:UniProtKB/Swiss-Prot;Acc:Q9LDR4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.