CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

plastid 2
mitochondrion 1
endoplasmic reticulum 3
extracellular 3
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH32646	Soybean	plasma membrane	76.71	43.75
CDY70397	Canola	endoplasmic reticulum, plasma membrane	97.26	38.48
AT3G52940.1	Thale cress	plasma membrane	95.21	37.67
KRH20023	Soybean	endoplasmic reticulum, plasma membrane	88.36	34.49
CDY66282	Canola	plasma membrane	85.62	33.97
Solyc09g009040.2.1	Tomato	plasma membrane	84.93	33.6
PGSC0003DMT400007043	Potato	endoplasmic reticulum	84.25	33.33
CDX76247	Canola	plasma membrane	80.82	33.24
VIT_08s0007g03930.t01	Wine grape	endoplasmic reticulum, plasma membrane	82.88	32.97
TraesCS1A01G416000.1	Wheat	plasma membrane	82.19	32.26
GSMUA_Achr3P22830_001	Banana	plasma membrane	83.56	32.19
TraesCS1D01G423500.1	Wheat	plasma membrane	82.19	31.91
EER96347	Sorghum	plasma membrane	80.14	31.62
Os09t0565600-01	Rice	plasma membrane	79.45	31.44
TraesCS1B01G446300.1	Wheat	plasma membrane	82.19	31.09
HORVU1Hr1G091090.9	Barley	mitochondrion, peroxisome, plasma membrane, plastid	82.88	28.07
Zm00001d006889_P004	Maize	plastid	77.4	25.92
Os01t0354200-01	Rice	endoplasmic reticulum, plasma membrane	49.32	22.36
CDY45061	Canola	plasma membrane	24.66	8.33
CDY03603	Canola	plasma membrane	24.66	8.33
CDY29319	Canola	plasma membrane	22.6	7.93
CDY07286	Canola	endoplasmic reticulum, plasma membrane, vacuole	13.01	6.15
CDY13326	Canola	plasma membrane	2.74	1.73
CDX67552	Canola	endoplasmic reticulum, plasma membrane, vacuole	2.74	1.73
CDY07287	Canola	endoplasmic reticulum, plasma membrane, vacuole	0.0	0.0

Protein Annotations

EnsemblPlants:CDX67551	EnsemblPlantsGene:GSBRNA2T00098684001	GO:A0A078BSD6	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016628	GO:GO:0055114	InterPro:Ergosterol_biosynth_ERG4_ERG24
InterPro:Sterol_reductase_CS	PANTHER:PTHR21257	PANTHER:PTHR21257:SF47	PFAM:PF01222	ProteinID:CDX67551	ProteinID:CDX67551.1
ScanProsite:PS01018	SEG:seg	TMHMM:TMhelix	UniParc:UPI0004EDE39A	MapMan:50.1.3	:

Description

BnaA07g15910D

Coordinates

chrLK031787:-:898938..900046

Molecular Weight (calculated)

17049.3 Da

IEP (calculated)

9.757

GRAVY (calculated)

0.211

Length

146 amino acids

Sequence
(BLAST)

001: MLDHSGWWLL HNKVELTVPA IVANCFVFLI GYMVFRGANK QKHIFKKNPK TPIWGKPPLV VGGKLLASGY WGIARHCNYL GDLMLALSFS LPCGISSPVP
101: YFYPIYLLIL LIWRERRDEV RCAEKYKEIW AEYLRLVPYR ILPYVY

Best Arabidopsis Sequence Match ( AT3G52940.1 )
(BLAST)

001: MLLDMDLGVL LPSLQSVYVL VFYFVYLAVA GEILPGKVIR GVLLSDGSQL RYRCNGLLAL ILLVAILGIC AKLGIVSPLV VADRGLELLS ATFIFCVLVT
101: LALYVTGRSS SNKGSSLKPH VSGNLVHDWW FGIQLNPQFM SIDLKFFFVR AGMMGWLLIN LSILAKSVQD GSLSQSMILY QIFCALYILD YFVHEEYMTS
201: TWDIIAERLG FMLVFGDLLW IPFTFSIQGW WLLHNKVELT VPAIVVNCLV FLIGYMVFRG ANKQKHIFKK NPKTPIWGKP PVVVGGKLLV SGYWGIARHC
301: NYLGDLMLAL SFSLPCGISS PVPYFYPIYL LILLIWRERR DEVRCAEKYK EIWAEYLRLV PWRILPYVY

Arabidopsis Description

FKDelta(14)-sterol reductase [Source:UniProtKB/Swiss-Prot;Acc:Q9LDR4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.