Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 8
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra019638.1-P | Field mustard | plasma membrane | 98.59 | 98.59 |
| CDY66282 | Canola | plasma membrane | 94.08 | 90.76 |
| CDX67552 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 57.18 | 87.88 |
| CDY13326 | Canola | plasma membrane | 56.62 | 87.01 |
| CDY70397 | Canola | endoplasmic reticulum, plasma membrane | 89.3 | 85.91 |
| AT3G52940.1 | Thale cress | plasma membrane | 88.73 | 85.37 |
| CDX67551 | Canola | endoplasmic reticulum, extracellular | 33.24 | 80.82 |
| KRH32646 | Soybean | plasma membrane | 55.77 | 77.34 |
| KRH20023 | Soybean | endoplasmic reticulum, plasma membrane | 76.06 | 72.19 |
| VIT_08s0007g03930.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 72.96 | 70.57 |
| PGSC0003DMT400007043 | Potato | endoplasmic reticulum | 73.24 | 70.46 |
| Solyc09g009040.2.1 | Tomato | plasma membrane | 72.39 | 69.65 |
| GSMUA_Achr3P22830_001 | Banana | plasma membrane | 69.86 | 65.44 |
| EER96347 | Sorghum | plasma membrane | 68.17 | 65.41 |
| Os09t0565600-01 | Rice | plasma membrane | 67.32 | 64.77 |
| TraesCS1D01G423500.1 | Wheat | plasma membrane | 67.32 | 63.56 |
| TraesCS1A01G416000.1 | Wheat | plasma membrane | 66.2 | 63.17 |
| Os01t0354200-01 | Rice | endoplasmic reticulum, plasma membrane | 56.62 | 62.42 |
| TraesCS1B01G446300.1 | Wheat | plasma membrane | 67.04 | 61.66 |
| HORVU1Hr1G091090.9 | Barley | mitochondrion, peroxisome, plasma membrane, plastid | 66.2 | 54.52 |
| Zm00001d006889_P004 | Maize | plastid | 61.69 | 50.23 |
| CDY45061 | Canola | plasma membrane | 26.48 | 21.76 |
| CDY03603 | Canola | plasma membrane | 26.48 | 21.76 |
| CDY29319 | Canola | plasma membrane | 22.25 | 18.99 |
| CDY07286 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 12.68 | 14.56 |
| CDY07287 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 4.79 | 11.81 |
Protein Annotations
| MapMan:5.5.1.3 | GO:A0A078CHL1 | EnsemblPlants:CDX76247 | ProteinID:CDX76247 | ProteinID:CDX76247.1 | InterPro:Ergosterol_biosynth_ERG4_ERG24 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 |
| GO:GO:0016628 | GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00126583001 | PFAM:PF01222 | ScanProsite:PS01017 | ScanProsite:PS01018 |
| PANTHER:PTHR21257 | PANTHER:PTHR21257:SF47 | InterPro:Sterol_reductase_CS | TMHMM:TMhelix | UniParc:UPI0004EDC3DF | SEG:seg |
Description
BnaA04g05110D
Coordinates
chrLK031806:+:2121733..2124602
Molecular Weight (calculated)
40477.3 Da
IEP (calculated)
9.208
GRAVY (calculated)
0.493
Length
355 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPRLLLPSS QSVCVLVFYF VYLAVAGEIL PGKVIRGVVL SDGSQLRYRC NGLFALSLLV AILGISAKLG VLSPLVVADR GLELLSATFI FCVLVTLVLY
101: ITGRSSSDKS SSLKPHVSGY LVHDWWFGIQ LNPQFIGIDL KFFFVRAGMM GWLLINLSIL AKCVQDGSLS QSMILYQIFC ALYILDYFVH EEYMTSTWDI
201: IAERLGFMLV FGDLLWIPFT FSIQAWMVAF AQQSRTNCSW YMVFRGANKQ KHIFKKNPKT PIWGKPPVVV GGKLLASGYW GIARHCNYLG DLMLALSFSL
301: PCGISSPVPY FYPIYLLILL IWRERRDEER CAEKYKEIWP KYLRLVPYRI LPYVY
101: ITGRSSSDKS SSLKPHVSGY LVHDWWFGIQ LNPQFIGIDL KFFFVRAGMM GWLLINLSIL AKCVQDGSLS QSMILYQIFC ALYILDYFVH EEYMTSTWDI
201: IAERLGFMLV FGDLLWIPFT FSIQAWMVAF AQQSRTNCSW YMVFRGANKQ KHIFKKNPKT PIWGKPPVVV GGKLLASGYW GIARHCNYLG DLMLALSFSL
301: PCGISSPVPY FYPIYLLILL IWRERRDEER CAEKYKEIWP KYLRLVPYRI LPYVY
001: MLLDMDLGVL LPSLQSVYVL VFYFVYLAVA GEILPGKVIR GVLLSDGSQL RYRCNGLLAL ILLVAILGIC AKLGIVSPLV VADRGLELLS ATFIFCVLVT
101: LALYVTGRSS SNKGSSLKPH VSGNLVHDWW FGIQLNPQFM SIDLKFFFVR AGMMGWLLIN LSILAKSVQD GSLSQSMILY QIFCALYILD YFVHEEYMTS
201: TWDIIAERLG FMLVFGDLLW IPFTFSIQGW WLLHNKVELT VPAIVVNCLV FLIGYMVFRG ANKQKHIFKK NPKTPIWGKP PVVVGGKLLV SGYWGIARHC
301: NYLGDLMLAL SFSLPCGISS PVPYFYPIYL LILLIWRERR DEVRCAEKYK EIWAEYLRLV PWRILPYVY
101: LALYVTGRSS SNKGSSLKPH VSGNLVHDWW FGIQLNPQFM SIDLKFFFVR AGMMGWLLIN LSILAKSVQD GSLSQSMILY QIFCALYILD YFVHEEYMTS
201: TWDIIAERLG FMLVFGDLLW IPFTFSIQGW WLLHNKVELT VPAIVVNCLV FLIGYMVFRG ANKQKHIFKK NPKTPIWGKP PVVVGGKLLV SGYWGIARHC
301: NYLGDLMLAL SFSLPCGISS PVPYFYPIYL LILLIWRERR DEVRCAEKYK EIWAEYLRLV PWRILPYVY
Arabidopsis Description
FKDelta(14)-sterol reductase [Source:UniProtKB/Swiss-Prot;Acc:Q9LDR4]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.