CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 5
plasma membrane 7
golgi 5
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os09t0565600-01	Rice	plasma membrane	85.95	86.18
TraesCS1D01G423500.1	Wheat	plasma membrane	87.3	85.9
TraesCS1A01G416000.1	Wheat	plasma membrane	86.22	85.75
Os01t0354200-01	Rice	endoplasmic reticulum, plasma membrane	73.24	84.16
TraesCS1B01G446300.1	Wheat	plasma membrane	86.22	82.64
CDX67551	Canola	endoplasmic reticulum, extracellular	31.62	80.14
KRH32646	Soybean	plasma membrane	52.7	76.17
GSMUA_Achr3P22830_001	Banana	plasma membrane	77.3	75.46
PGSC0003DMT400007043	Potato	endoplasmic reticulum	72.43	72.63
Solyc09g009040.2.1	Tomato	plasma membrane	71.89	72.09
HORVU1Hr1G091090.9	Barley	mitochondrion, peroxisome, plasma membrane, plastid	83.78	71.93
KRH20023	Soybean	endoplasmic reticulum, plasma membrane	72.16	71.39
VIT_08s0007g03930.t01	Wine grape	endoplasmic reticulum, plasma membrane	70.0	70.57
AT3G52940.1	Thale cress	plasma membrane	70.0	70.19
Zm00001d006889_P004	Maize	plastid	81.35	69.04
CDY70397	Canola	endoplasmic reticulum, plasma membrane	68.65	68.83
CDY66282	Canola	plasma membrane	67.84	68.21
CDX76247	Canola	plasma membrane	65.41	68.17
Bra019638.1-P	Field mustard	plasma membrane	65.14	67.89
CDX67552	Canola	endoplasmic reticulum, plasma membrane, vacuole	39.46	63.2
CDY13326	Canola	plasma membrane	37.84	60.61
EES05015	Sorghum	plasma membrane	26.76	21.81

Protein Annotations

Gene3D:1.20.120.1630	MapMan:5.5.1.3	EntrezGene:8059782	UniProt:C5X5W1	EnsemblPlants:EER96347	ProteinID:EER96347
ProteinID:EER96347.1	InterPro:Ergosterol_biosynth_ERG4_ERG24	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0016020	GO:GO:0016021	GO:GO:0016126	GO:GO:0030176	GO:GO:0050613
GO:GO:0055114	PFAM:PF01222	PANTHER:PTHR21257	PANTHER:PTHR21257:SF47	EnsemblPlantsGene:SORBI_3002G133000	unigene:Sbi.8456
TMHMM:TMhelix	UniParc:UPI0001A835EC	RefSeq:XP_002459826.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr2:+:19063414..19068091

Molecular Weight (calculated)

41652.7 Da

IEP (calculated)

9.419

GRAVY (calculated)

0.619

Length

370 amino acids

Sequence
(BLAST)

001: MEAAAAVLPA LVPSGSAVVV LVAYLGYLAA AGAILPGKLV DGAILSDSSR LHYRCNGLLS LLLLLGLSAL GVYMGWMSPT VVADRGLELL SVTFIFSVIV
101: SFALYFAGIK SRHKSSSLRP HVSGSFIQDW WLGVQLNPHF MGIDLKFFFV RAGMMAWLFI NLSLFAKSYL AGSANLSVIL YQFFCAWYII DYFIHEEFMT
201: STWDIIAERL GFMLVFGDLV FIPFTFTIQG WWLLRNKVEL SLLAGLANLC IFLIGYLVFR GANKQKHVFK KDPKAPIWGR PPKVVGGKLL ASGYWGIARH
301: CNYLGDLLLA LSFSLPCGVS SVIPYFYPTY LLILLIWRER RDEARCSQKY REIWAEYCKL VPWRILPYVY

Best Arabidopsis Sequence Match ( AT3G52940.1 )
(BLAST)

001: MLLDMDLGVL LPSLQSVYVL VFYFVYLAVA GEILPGKVIR GVLLSDGSQL RYRCNGLLAL ILLVAILGIC AKLGIVSPLV VADRGLELLS ATFIFCVLVT
101: LALYVTGRSS SNKGSSLKPH VSGNLVHDWW FGIQLNPQFM SIDLKFFFVR AGMMGWLLIN LSILAKSVQD GSLSQSMILY QIFCALYILD YFVHEEYMTS
201: TWDIIAERLG FMLVFGDLLW IPFTFSIQGW WLLHNKVELT VPAIVVNCLV FLIGYMVFRG ANKQKHIFKK NPKTPIWGKP PVVVGGKLLV SGYWGIARHC
301: NYLGDLMLAL SFSLPCGISS PVPYFYPIYL LILLIWRERR DEVRCAEKYK EIWAEYLRLV PWRILPYVY

Arabidopsis Description

FKDelta(14)-sterol reductase [Source:UniProtKB/Swiss-Prot;Acc:Q9LDR4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.