Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 8
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX67552 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 96.1 | 96.1 |
| CDY70397 | Canola | endoplasmic reticulum, plasma membrane | 94.81 | 59.35 |
| CDY66282 | Canola | plasma membrane | 90.91 | 57.07 |
| CDX76247 | Canola | plasma membrane | 87.01 | 56.62 |
| AT3G52940.1 | Thale cress | plasma membrane | 89.18 | 55.83 |
| Os01t0354200-01 | Rice | endoplasmic reticulum, plasma membrane | 63.2 | 45.34 |
| KRH20023 | Soybean | endoplasmic reticulum, plasma membrane | 72.73 | 44.92 |
| PGSC0003DMT400007043 | Potato | endoplasmic reticulum | 69.7 | 43.63 |
| Solyc09g009040.2.1 | Tomato | plasma membrane | 68.4 | 42.82 |
| VIT_08s0007g03930.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 67.1 | 42.23 |
| KRH32646 | Soybean | plasma membrane | 44.16 | 39.84 |
| GSMUA_Achr3P22830_001 | Banana | plasma membrane | 63.64 | 38.79 |
| Os09t0565600-01 | Rice | plasma membrane | 61.47 | 38.48 |
| EER96347 | Sorghum | plasma membrane | 60.61 | 37.84 |
| TraesCS1D01G423500.1 | Wheat | plasma membrane | 59.74 | 36.7 |
| TraesCS1A01G416000.1 | Wheat | plasma membrane | 58.01 | 36.02 |
| TraesCS1B01G446300.1 | Wheat | plasma membrane | 59.74 | 35.75 |
| HORVU1Hr1G091090.9 | Barley | mitochondrion, peroxisome, plasma membrane, plastid | 57.58 | 30.86 |
| Zm00001d006889_P004 | Maize | plastid | 50.22 | 26.61 |
| CDY45061 | Canola | plasma membrane | 26.84 | 14.35 |
| CDY03603 | Canola | plasma membrane | 26.84 | 14.35 |
| CDY07287 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 8.66 | 13.89 |
| CDY29319 | Canola | plasma membrane | 21.64 | 12.02 |
| CDY07286 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 10.82 | 8.09 |
| CDX67551 | Canola | endoplasmic reticulum, extracellular | 1.73 | 2.74 |
Protein Annotations
| MapMan:5.5.1.3 | GO:A0A078FJF3 | UniProt:A0A078FJF3 | EnsemblPlants:CDY13326 | ProteinID:CDY13326 | ProteinID:CDY13326.1 |
| InterPro:Ergosterol_biosynth_ERG4_ERG24 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016628 | GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00071322001 | PFAM:PF01222 |
| ScanProsite:PS01017 | PANTHER:PTHR21257 | PANTHER:PTHR21257:SF47 | InterPro:Sterol_reductase_CS | TMHMM:TMhelix | UniParc:UPI0004EE6133 |
| SEG:seg | : | : | : | : | : |
Description
BnaC06g14310DBnaC06g14310D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FJF3]
Coordinates
chrLK032034:+:337396..339220
Molecular Weight (calculated)
25781.1 Da
IEP (calculated)
7.936
GRAVY (calculated)
0.773
Length
231 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLGVLLRSL IPSLQSVYVL VSYFVYLAVA GELLPGKVIR GVVLSDGSQL RYRCNGLFAL TLLVAILGIS AKLGIVSPLV VADRGLELLS ATFIFCVLVT
101: LVLYITGRSS SDKSSSLKPH VSGNLVHDWW FGIQLNPQFL SIDLKFFFVR AGMMGWLLIN LSILAKSVQD DSLSQSMILY QIFCALYILD YFVHEEYMTS
201: TWDITAKRLG FMLVFGDLLC IPFKFSIQAW N
101: LVLYITGRSS SDKSSSLKPH VSGNLVHDWW FGIQLNPQFL SIDLKFFFVR AGMMGWLLIN LSILAKSVQD DSLSQSMILY QIFCALYILD YFVHEEYMTS
201: TWDITAKRLG FMLVFGDLLC IPFKFSIQAW N
001: MLLDMDLGVL LPSLQSVYVL VFYFVYLAVA GEILPGKVIR GVLLSDGSQL RYRCNGLLAL ILLVAILGIC AKLGIVSPLV VADRGLELLS ATFIFCVLVT
101: LALYVTGRSS SNKGSSLKPH VSGNLVHDWW FGIQLNPQFM SIDLKFFFVR AGMMGWLLIN LSILAKSVQD GSLSQSMILY QIFCALYILD YFVHEEYMTS
201: TWDIIAERLG FMLVFGDLLW IPFTFSIQAW LVAFAQQSRT NSSCDCSQLP CLLDRVHGFS RS
101: LALYVTGRSS SNKGSSLKPH VSGNLVHDWW FGIQLNPQFM SIDLKFFFVR AGMMGWLLIN LSILAKSVQD GSLSQSMILY QIFCALYILD YFVHEEYMTS
201: TWDIIAERLG FMLVFGDLLW IPFTFSIQAW LVAFAQQSRT NSSCDCSQLP CLLDRVHGFS RS
Arabidopsis Description
FKDelta(14)-sterol reductase [Source:UniProtKB/Swiss-Prot;Acc:Q9LDR4]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.