CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:

nucleus 1
cytosol 2
extracellular 3
endoplasmic reticulum 5
vacuole 3
plasma membrane 4
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	endoplasmic reticulum
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH32646	Soybean	plasma membrane	64.97	94.92
CDX67551	Canola	endoplasmic reticulum, extracellular	34.49	88.36
VIT_08s0007g03930.t01	Wine grape	endoplasmic reticulum, plasma membrane	80.48	82.02
PGSC0003DMT400007043	Potato	endoplasmic reticulum	80.48	81.57
Solyc09g009040.2.1	Tomato	plasma membrane	80.21	81.3
AT3G52940.1	Thale cress	plasma membrane	79.41	80.49
CDY70397	Canola	endoplasmic reticulum, plasma membrane	78.61	79.67
CDY66282	Canola	plasma membrane	76.2	77.45
Bra019638.1-P	Field mustard	plasma membrane	72.73	76.62
CDX76247	Canola	plasma membrane	72.19	76.06
CDX67552	Canola	endoplasmic reticulum, plasma membrane, vacuole	45.99	74.46
GSMUA_Achr3P22830_001	Banana	plasma membrane	73.8	72.82
CDY13326	Canola	plasma membrane	44.92	72.73
EER96347	Sorghum	plasma membrane	71.39	72.16
Os09t0565600-01	Rice	plasma membrane	70.59	71.54
TraesCS1D01G423500.1	Wheat	plasma membrane	70.32	69.95
TraesCS1A01G416000.1	Wheat	plasma membrane	68.98	69.35
Os01t0354200-01	Rice	endoplasmic reticulum, plasma membrane	58.82	68.32
TraesCS1B01G446300.1	Wheat	plasma membrane	70.32	68.13
HORVU1Hr1G091090.9	Barley	mitochondrion, peroxisome, plasma membrane, plastid	68.98	59.86
Zm00001d006889_P004	Maize	plastid	63.1	54.13
KRH44662	Soybean	endoplasmic reticulum	27.27	23.61

Protein Annotations

Gene3D:1.20.120.1630	MapMan:5.5.1.3	EMBL:ACUP02008225	InterPro:Ergosterol_biosynth_ERG4_ERG24	EnsemblPlantsGene:GLYMA_13G150900	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783
GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016020	GO:GO:0016021
GO:GO:0016126	GO:GO:0016628	GO:GO:0030176	GO:GO:0050613	GO:GO:0055114	UniProt:I1LZF1
EnsemblPlants:KRH20023	ProteinID:KRH20023	ProteinID:KRH20023.1	PFAM:PF01222	ScanProsite:PS01017	PANTHER:PTHR21257
PANTHER:PTHR21257:SF47	InterPro:Sterol_reductase_CS	TMHMM:TMhelix	UniParc:UPI0000039912	SEG:seg	:

Description

hypothetical protein

Coordinates

chr13:+:26459345..26467100

Molecular Weight (calculated)

42316.8 Da

IEP (calculated)

8.969

GRAVY (calculated)

0.527

Length

374 amino acids

Sequence
(BLAST)

001: MMESHVDLGF LLQALTPSWN SVPLLVGFFT YLAVAGSILP GKLVPGVALL DGTRLHYCCN GLLSLLLLVA LLGIGAKMGF VSPTAISDRG LELLSTTFAF
101: SFLVTLILHF SGCKSQSKGS SLKPHLSGNL IHDWWFGIQL NPQFMGIDLK FFFVRAGMMG WLLINLSILM KSIQDGTLSQ SMILYQLFCA LYILDYFVHE
201: EYMTSTWDII AERLGFMLVF GDLVWIPFSF SIQGWWLLMN SVELTPAAIV ANCFVFLIGY MVFRGANKQK HVFKKNPKAP IWGKPPKVIG GKLLASGYWG
301: IARHCNYLGD LMLALSFSLP CGISSPIPYF YPIYLLILLI WRERRDEARC AEKYREIWAE YRKLVPWRIL PYVY

Best Arabidopsis Sequence Match ( AT3G52940.1 )
(BLAST)

001: MLLDMDLGVL LPSLQSVYVL VFYFVYLAVA GEILPGKVIR GVLLSDGSQL RYRCNGLLAL ILLVAILGIC AKLGIVSPLV VADRGLELLS ATFIFCVLVT
101: LALYVTGRSS SNKGSSLKPH VSGNLVHDWW FGIQLNPQFM SIDLKFFFVR AGMMGWLLIN LSILAKSVQD GSLSQSMILY QIFCALYILD YFVHEEYMTS
201: TWDIIAERLG FMLVFGDLLW IPFTFSIQGW WLLHNKVELT VPAIVVNCLV FLIGYMVFRG ANKQKHIFKK NPKTPIWGKP PVVVGGKLLV SGYWGIARHC
301: NYLGDLMLAL SFSLPCGISS PVPYFYPIYL LILLIWRERR DEVRCAEKYK EIWAEYLRLV PWRILPYVY

Arabidopsis Description

FKDelta(14)-sterol reductase [Source:UniProtKB/Swiss-Prot;Acc:Q9LDR4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.