Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 3
- cytosol 1
- mitochondrion 1
- golgi 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY43354 | Canola | cytosol, golgi, nucleus | 68.32 | 51.88 |
| CDX75706 | Canola | cytosol, golgi, nucleus | 56.77 | 40.95 |
| CDX82542 | Canola | plastid | 57.1 | 39.05 |
| AT3G13360.2 | Thale cress | extracellular, plasma membrane, vacuole | 52.81 | 30.89 |
| CDY17403 | Canola | nucleus | 20.46 | 22.46 |
| CDY32806 | Canola | cytosol, golgi, nucleus | 19.8 | 21.51 |
| Os04t0471300-01 | Rice | cytosol, golgi, nucleus | 21.12 | 21.19 |
| Solyc07g066170.2.1 | Tomato | nucleus | 23.1 | 20.9 |
| TraesCS2B01G351300.1 | Wheat | cytosol, golgi, nucleus | 19.8 | 20.13 |
| Zm00001d003334_P001 | Maize | cytosol, nucleus, plastid | 19.14 | 18.83 |
| VIT_19s0015g01790.t01 | Wine grape | nucleus | 31.68 | 15.64 |
| CDX94330 | Canola | nucleus | 24.75 | 15.27 |
| CDX89333 | Canola | nucleus | 24.75 | 15.15 |
| PGSC0003DMT400022426 | Potato | nucleus | 29.04 | 15.02 |
| PGSC0003DMT400056956 | Potato | nucleus | 29.37 | 14.88 |
| GSMUA_Achr10P... | Banana | cytosol | 24.75 | 14.88 |
| KRH62532 | Soybean | endoplasmic reticulum | 28.71 | 14.87 |
| OQU81760 | Sorghum | nucleus | 20.46 | 14.55 |
| HORVU2Hr1G081800.3 | Barley | cytosol, nucleus | 22.11 | 14.5 |
| TraesCS7A01G240200.1 | Wheat | cytosol | 25.41 | 14.15 |
| KRH56393 | Soybean | cytosol | 27.06 | 13.97 |
| TraesCS5A01G257000.1 | Wheat | cytosol, golgi, nucleus, plastid | 24.75 | 13.76 |
| TraesCS7B01G135800.1 | Wheat | cytosol, golgi, nucleus | 24.42 | 13.75 |
| TraesCS5B01G256500.1 | Wheat | cytosol, golgi, nucleus, plastid | 24.42 | 13.55 |
| TraesCS5D01G265600.1 | Wheat | nucleus | 24.42 | 13.41 |
| TraesCS2D01G332000.1 | Wheat | cytosol | 22.44 | 13.33 |
| TraesCS7D01G238200.1 | Wheat | cytosol | 23.43 | 13.22 |
| TraesCS2A01G331000.1 | Wheat | cytosol | 22.11 | 13.14 |
| HORVU7Hr1G048940.3 | Barley | cytosol | 24.42 | 12.96 |
| HORVU5Hr1G071910.1 | Barley | nucleus | 23.43 | 12.96 |
| Os08t0497900-01 | Rice | nucleus | 19.47 | 12.77 |
| Zm00001d025667_P001 | Maize | cytosol | 20.13 | 12.5 |
| GSMUA_Achr4P01630_001 | Banana | cytosol, golgi, nucleus | 24.42 | 12.44 |
| Zm00001d005997_P002 | Maize | plastid | 21.78 | 12.27 |
| EER96942 | Sorghum | cytosol, golgi, nucleus, plastid | 21.78 | 12.18 |
| GSMUA_Achr3P04120_001 | Banana | nucleus | 23.76 | 12.12 |
| Os09t0481300-01 | Rice | nucleus | 20.46 | 11.76 |
| EES14314 | Sorghum | nucleus | 19.47 | 11.66 |
| Zm00001d020879_P001 | Maize | cytosol, golgi, nucleus, plastid | 15.18 | 11.47 |
Protein Annotations
| EnsemblPlants:CDY24192 | EnsemblPlantsGene:GSBRNA2T00026286001 | GO:A0A078GGB6 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| ncoils:Coil | PANTHER:PTHR34562 | ProteinID:CDY24192 | ProteinID:CDY24192.1 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI0004EEC3BA | UniProt:A0A078GGB6 | MapMan:20.4.2.1.2 | : | : | : |
Description
BnaC01g37720DBnaC01g37720D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GGB6]
Coordinates
chrLK032155:+:169529..171313
Molecular Weight (calculated)
33339.5 Da
IEP (calculated)
5.819
GRAVY (calculated)
-0.460
Length
303 amino acids
Sequence
(BLAST)
(BLAST)
001: MMTHHLPSVV NGFSPIPGLF TVGQGFDKSE ELSGSSTAAK NVVGGRGKIV SGRQGSDTIK NGSDFVFSSG AVSVGEKDER LMMNHITTEG QEAREQVETY
101: SRSENGGEGE DGDESHKKKN NHCWADKDHV ADSIRSLAAL QEALWKEVTS FQELSKESIP PLHSNNDEVD PGSQVLILKQ KVKNLQHKLE EARADLDTKE
201: ARIQELENAK IECELEGVFQ RKIEAEIQHL LLTSSLSASL QVIKEQPKKV HSVTEDPEPN RGAMLGKTCK SSFYFLIQLI LLVSILRLLL LQSSPASRLV
301: IPT
101: SRSENGGEGE DGDESHKKKN NHCWADKDHV ADSIRSLAAL QEALWKEVTS FQELSKESIP PLHSNNDEVD PGSQVLILKQ KVKNLQHKLE EARADLDTKE
201: ARIQELENAK IECELEGVFQ RKIEAEIQHL LLTSSLSASL QVIKEQPKKV HSVTEDPEPN RGAMLGKTCK SSFYFLIQLI LLVSILRLLL LQSSPASRLV
301: IPT
001: MNESVPDSVE DNGNSVPANG LLVLPDNDHE EGGVGSPQRS NSVESPGGSV HSTRKGFGLK KWRRIKRDGP VRDEAAPVDD GSKLLKRGLA GLVNPPSKHV
101: EFSSVEARQS SEGSVGSVNM VHHPGVANGF SPDIGCMFAV GQAFEKSEEH SGNTIGGKNV VGGKVVSGSQ EKLWSDTIKR ASEERGDIEK EKPCSSLDSD
201: LRSSDFVFST GSVSVGNHGE KDERLTMNYI GGFSNEGQVK EEVQTYSRSE NGNKEDDGES KKNNNHWADK DALADSIRSF AVLQEVLWKE VQSFQELGKE
301: SVLLHSNTDE LSSDQPSHQN CKEDNSTSSG SKALILKEKV KLLEHKLEEA RAALEAKEAR IQELENSKIE SELECIFQRK IETEIEHLML TRSLSSLQVL
401: QETKKLHSLK EDPVSNRGNI LGKTCKLGFY ILTQLILLVS ILRFLVLQFS PASRLVIPT
101: EFSSVEARQS SEGSVGSVNM VHHPGVANGF SPDIGCMFAV GQAFEKSEEH SGNTIGGKNV VGGKVVSGSQ EKLWSDTIKR ASEERGDIEK EKPCSSLDSD
201: LRSSDFVFST GSVSVGNHGE KDERLTMNYI GGFSNEGQVK EEVQTYSRSE NGNKEDDGES KKNNNHWADK DALADSIRSF AVLQEVLWKE VQSFQELGKE
301: SVLLHSNTDE LSSDQPSHQN CKEDNSTSSG SKALILKEKV KLLEHKLEEA RAALEAKEAR IQELENSKIE SELECIFQRK IETEIEHLML TRSLSSLQVL
401: QETKKLHSLK EDPVSNRGNI LGKTCKLGFY ILTQLILLVS ILRFLVLQFS PASRLVIPT
Arabidopsis Description
WIP3WPP domain interacting protein 3 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSR4]
SUBAcon: [golgi,nucleus,cytosol]
SUBAcon: [golgi,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.