Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc07g066170.2.1 | Tomato | nucleus | 49.67 | 88.66 |
| PGSC0003DMT400022426 | Potato | nucleus | 48.16 | 49.15 |
| VIT_19s0015g01790.t01 | Wine grape | nucleus | 36.96 | 35.99 |
| KRH62532 | Soybean | endoplasmic reticulum | 33.44 | 34.19 |
| KRH56393 | Soybean | cytosol | 32.44 | 33.05 |
| Bra002835.1-P | Field mustard | cytosol, golgi, nucleus | 14.55 | 31.52 |
| CDY17403 | Canola | nucleus | 14.38 | 31.16 |
| CDY43354 | Canola | cytosol, golgi, nucleus | 20.57 | 30.83 |
| CDY32806 | Canola | cytosol, golgi, nucleus | 14.05 | 30.11 |
| Bra039387.1-P | Field mustard | cytosol, golgi, nucleus, plastid | 20.07 | 30.0 |
| CDX75706 | Canola | cytosol, golgi, nucleus | 21.07 | 30.0 |
| AT5G56210.1 | Thale cress | nucleus | 25.08 | 29.47 |
| CDY24192 | Canola | plastid | 14.88 | 29.37 |
| Bra001502.1-P | Field mustard | nucleus, plastid | 21.57 | 29.19 |
| CDX82542 | Canola | plastid | 21.57 | 29.12 |
| GSMUA_Achr10P... | Banana | cytosol | 23.75 | 28.17 |
| Zm00001d003334_P001 | Maize | cytosol, nucleus, plastid | 13.88 | 26.95 |
| TraesCS2B01G351300.1 | Wheat | cytosol, golgi, nucleus | 13.38 | 26.85 |
| AT4G26455.1 | Thale cress | nucleus | 21.91 | 26.79 |
| GSMUA_Achr3P04120_001 | Banana | nucleus | 26.59 | 26.77 |
| Bra026434.1-P | Field mustard | nucleus | 22.07 | 26.67 |
| CDX89333 | Canola | nucleus | 21.91 | 26.46 |
| CDX94330 | Canola | nucleus | 21.4 | 26.07 |
| TraesCS7B01G135800.1 | Wheat | cytosol, golgi, nucleus | 23.24 | 25.84 |
| EER96942 | Sorghum | cytosol, golgi, nucleus, plastid | 23.41 | 25.83 |
| Zm00001d020879_P001 | Maize | cytosol, golgi, nucleus, plastid | 17.06 | 25.44 |
| Zm00001d005997_P002 | Maize | plastid | 22.74 | 25.28 |
| Os04t0471300-01 | Rice | cytosol, golgi, nucleus | 12.71 | 25.17 |
| GSMUA_Achr4P01630_001 | Banana | cytosol, golgi, nucleus | 24.92 | 25.04 |
| TraesCS7A01G240200.1 | Wheat | cytosol | 22.74 | 25.0 |
| AT3G13360.2 | Thale cress | extracellular, plasma membrane, vacuole | 21.24 | 24.52 |
| TraesCS7D01G238200.1 | Wheat | cytosol | 21.57 | 24.02 |
| EES14314 | Sorghum | nucleus | 20.23 | 23.91 |
| HORVU5Hr1G071910.1 | Barley | nucleus | 21.91 | 23.91 |
| TraesCS5A01G257000.1 | Wheat | cytosol, golgi, nucleus, plastid | 21.74 | 23.85 |
| TraesCS5D01G265600.1 | Wheat | nucleus | 21.91 | 23.73 |
| TraesCS5B01G256500.1 | Wheat | cytosol, golgi, nucleus, plastid | 21.4 | 23.44 |
| Os09t0481300-01 | Rice | nucleus | 20.57 | 23.34 |
| OQU81760 | Sorghum | nucleus | 16.56 | 23.24 |
| Os08t0497900-01 | Rice | nucleus | 17.89 | 23.16 |
| HORVU7Hr1G048940.3 | Barley | cytosol | 21.74 | 22.77 |
| HORVU2Hr1G081800.3 | Barley | cytosol, nucleus | 16.39 | 21.21 |
| TraesCS2A01G331000.1 | Wheat | cytosol | 17.22 | 20.2 |
| Zm00001d025667_P001 | Maize | cytosol | 16.39 | 20.08 |
| TraesCS2D01G332000.1 | Wheat | cytosol | 16.56 | 19.41 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400056956 | EnsemblPlantsGene:PGSC0003DMG400022146 | EntrezGene:102592892 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| ncoils:Coil | PANTHER:PTHR34562 | PANTHER:PTHR34562:SF1 | PGSC:PGSC0003DMG400022146 | RefSeq:XP_006346075.1 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI0002961994 | UniProt:M1C051 | MapMan:20.4.2.1.2 | : | : |
Description
WPP domain-interacting protein 2 [Source:PGSC_GENE;Acc:PGSC0003DMG400022146]
Coordinates
chr7:-:56074923..56079509
Molecular Weight (calculated)
65244.4 Da
IEP (calculated)
4.697
GRAVY (calculated)
-0.696
Length
598 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLEEQNSAS KSVQDNEEMI TPPRFENGNQ SKVESSNGSS PPGDNSSNNN LDDVKGKGIE IKEAEDYSTP LVKSSPTTKG FGLKKWKRMK RDAQRQDGDS
101: SVNSGKLLKR GLASEVANAE KPVSFSAGRI QKSDGSVSST NAVFMNPGVL ADGFGVIGDS GLAMGPIFNA VSESENSEDR SSRSSTAASA PKARYEAPVL
201: PGYPSDKHWL RSLSGNSLST SAQKPHQGKG RSETSKKPRG ERVKIEKENS HSSMESDSHS SNFLFMQGDF ATSNGTKGER SMIYDGESSD EAQDRERPIG
301: EELRAGLERG NDRESENVSQ EDLAAESPWE VNEEKSENRG SSTDHDPLTE SIFNFQAAQE ALANEIQKFK EIGEDTTFGH SLEDVGIPSN FTSDDSNFPR
401: PSTSVLSQNR DGAQHSLNSL ESEVFSLKQN ILLLQNKVQK AADLVISKEA RITELEAILG SSSKSEEETI ESEFEVLFRQ KIEAEVQYLA LSTTAQKLRS
501: AAVDQLTLLE EQKTLASEQA QMVHVLGDAE AKAVVLKTQT KKLESYCEDL ASTAEKLKLQ KKVCKYSSCF FIQLLLLAAV VGLFLMQISP DHAELVPT
101: SVNSGKLLKR GLASEVANAE KPVSFSAGRI QKSDGSVSST NAVFMNPGVL ADGFGVIGDS GLAMGPIFNA VSESENSEDR SSRSSTAASA PKARYEAPVL
201: PGYPSDKHWL RSLSGNSLST SAQKPHQGKG RSETSKKPRG ERVKIEKENS HSSMESDSHS SNFLFMQGDF ATSNGTKGER SMIYDGESSD EAQDRERPIG
301: EELRAGLERG NDRESENVSQ EDLAAESPWE VNEEKSENRG SSTDHDPLTE SIFNFQAAQE ALANEIQKFK EIGEDTTFGH SLEDVGIPSN FTSDDSNFPR
401: PSTSVLSQNR DGAQHSLNSL ESEVFSLKQN ILLLQNKVQK AADLVISKEA RITELEAILG SSSKSEEETI ESEFEVLFRQ KIEAEVQYLA LSTTAQKLRS
501: AAVDQLTLLE EQKTLASEQA QMVHVLGDAE AKAVVLKTQT KKLESYCEDL ASTAEKLKLQ KKVCKYSSCF FIQLLLLAAV VGLFLMQISP DHAELVPT
001: MDLESESSVL ESVEDNNGLI GDLDKELNSP VETSPLISKG FGLRKWKRRL RRDLVKDDTS VSMENSKALK RVLSGLVDPN AKQMHLPGPE VRQDSVGSVG
101: SVNSVVGFVM GGESYGNGLA FAAGVDSDNS EDRSSTMSHS WDKHRGKVSG GKSVISSGDS SQQRKSSVEK SNKLRGERIK IEKENSHSSM ESADSRSSNF
201: VFMQGASYSL SSREQGGRRM MDYDDENSDH DAHTSKRKDN VEEEEEETED YSQGDCVEES QIKSNGSSDN LDPLIVAVNS FQTLQEALQK ELQKFQELGK
301: EEPITSLHDG GESSSCIHAG HEGASEASSS YRFGSEKMGE MELTSLDSEI LNLVNNVEHL EIKLEEAKRI LEVKETQIRE LESTINVSET CNGGTEIGIE
401: DIFQQKVEAE IEYIIFSRSV GNLKRRIKLI EEEKTLGLSK LDKAETKAEN LKNQAQDLQN HCVEITEIQE VECLKKRAFK TTRCLLLQLG LLFILYYSLL
501: PEPEIAVPT
101: SVNSVVGFVM GGESYGNGLA FAAGVDSDNS EDRSSTMSHS WDKHRGKVSG GKSVISSGDS SQQRKSSVEK SNKLRGERIK IEKENSHSSM ESADSRSSNF
201: VFMQGASYSL SSREQGGRRM MDYDDENSDH DAHTSKRKDN VEEEEEETED YSQGDCVEES QIKSNGSSDN LDPLIVAVNS FQTLQEALQK ELQKFQELGK
301: EEPITSLHDG GESSSCIHAG HEGASEASSS YRFGSEKMGE MELTSLDSEI LNLVNNVEHL EIKLEEAKRI LEVKETQIRE LESTINVSET CNGGTEIGIE
401: DIFQQKVEAE IEYIIFSRSV GNLKRRIKLI EEEKTLGLSK LDKAETKAEN LKNQAQDLQN HCVEITEIQE VECLKKRAFK TTRCLLLQLG LLFILYYSLL
501: PEPEIAVPT
Arabidopsis Description
WIP2WPP domain-interacting protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FH18]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.