Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 3
- golgi 2
- cytosol 1
- plastid 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P24090_001 | Banana | extracellular, golgi, plasma membrane | 42.11 | 66.67 |
| GSMUA_Achr3P05290_001 | Banana | extracellular | 40.94 | 63.06 |
| AT2G26240.1 | Thale cress | cytosol, extracellular | 39.18 | 62.04 |
| HORVU2Hr1G112370.1 | Barley | golgi, mitochondrion, plastid | 35.09 | 59.41 |
| PGSC0003DMT400040171 | Potato | plastid | 79.53 | 55.28 |
| PGSC0003DMT400040170 | Potato | plastid | 79.53 | 55.28 |
| Solyc11g073240.1.1 | Tomato | plastid | 74.27 | 51.0 |
| CDY11499 | Canola | endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 39.18 | 49.63 |
| Bra007767.1-P | Field mustard | cytosol | 35.09 | 45.8 |
| CDX76725 | Canola | endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 38.6 | 45.21 |
| TraesCS2A01G506400.1 | Wheat | plastid | 53.22 | 44.17 |
| TraesCS2B01G534700.1 | Wheat | golgi | 52.63 | 43.69 |
| TraesCS2D01G507100.1 | Wheat | golgi | 52.63 | 43.69 |
| EES12994 | Sorghum | plastid | 50.29 | 41.35 |
| CDY30952 | Canola | plastid | 52.63 | 41.1 |
| Bra019447.1-P | Field mustard | plastid | 52.63 | 41.1 |
| KRH19425 | Soybean | plastid | 54.39 | 40.79 |
| KRH02516 | Soybean | plastid | 52.63 | 40.54 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum, extracellular, plasma membrane | 19.88 | 38.64 |
| Zm00001d002028_P001 | Maize | plastid | 41.52 | 38.38 |
| CDY44845 | Canola | plastid | 50.88 | 37.18 |
| VIT_07s0130g00480.t01 | Wine grape | plastid | 53.22 | 36.99 |
| AT3G43520.1 | Thale cress | plastid | 50.29 | 35.83 |
| HORVU2Hr1G112380.1 | Barley | peroxisome | 43.27 | 34.1 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 18.13 | 32.98 |
| Zm00001d026478_P001 | Maize | extracellular, plastid | 28.66 | 31.41 |
| Os04t0653100-01 | Rice | plasma membrane, plastid | 50.88 | 28.34 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400040174 | EnsemblPlantsGene:PGSC0003DMG400015542 | Gene3D:1.20.58.1140 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:TMEM14 | PANTHER:PTHR12668 | PANTHER:PTHR12668:SF5 | PFAM:PF03647 | PGSC:PGSC0003DMG400015542 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI000294A375 | UniProt:M1B9G3 | MapMan:24.2.22 | : | : |
Description
Transmembrane protein 14 [Source:PGSC_GENE;Acc:PGSC0003DMG400015542]
Coordinates
chr11:+:45376444..45376959
Molecular Weight (calculated)
17331.0 Da
IEP (calculated)
9.897
GRAVY (calculated)
0.104
Length
171 amino acids
Sequence
(BLAST)
(BLAST)
001: MPTTFTVDPA GPGITILPEA DGDGGGDSGG TNGGRGDNGG NNNEGGSDEG ENHNSKKKMA LSMSQKLTLG YAFLVGAGGF MGYLKSGSTK SLIAGGVSAS
101: LLYAVYTMLP TQPVLASAIG FVLSAGLLGV MGSRFLKSKK VFPAGVVSFV SFVMTGGYLH GILRIRSPKM S
101: LLYAVYTMLP TQPVLASAIG FVLSAGLLGV MGSRFLKSKK VFPAGVVSFV SFVMTGGYLH GILRIRSPKM S
001: MADLILSSSS AQSSLLHVRP NHYLLNTSTA SPIRSVRFQN SNGFHPLAFA SGHRRLPLGA VVPSDSTKTI TSTITANCVD SGVKAVEVEP TIDYGGGGGI
101: GGDKFGGGGG GGDGNDDGGE DDKEESDGKK STPLSMSQKL TLGYAFLVGV GGLMGYLKSG SQKSLLAGGL SAAVLLYVFS QLPTKPVLAS TVGVVMAGAL
201: MYVMGTRYMR SKKIFPAGVV SIMSFIMTGG YIHGIMRSLH
101: GGDKFGGGGG GGDGNDDGGE DDKEESDGKK STPLSMSQKL TLGYAFLVGV GGLMGYLKSG SQKSLLAGGL SAAVLLYVFS QLPTKPVLAS TVGVVMAGAL
201: MYVMGTRYMR SKKIFPAGVV SIMSFIMTGG YIHGIMRSLH
Arabidopsis Description
FAX2Protein FATTY ACID EXPORT 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q94A32]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.