Factsheet for HORVU2Hr1G112380.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	mitochondrion, peroxisome
iPSORT:	mitochondrion
MultiLoc:	peroxisome

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G076010.1
HORVU3Hr1G026980.2
HORVU3Hr1G071060.1
HORVU7Hr1G000910.1
HORVU7Hr1G070780.5

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G43520.1	HORVU7Hr1G000910.1	AT1G01010.1	21798944
AT3G43520.1	HORVU1Hr1G076010.1	AT3G16310.1	21798944
AT3G43520.1	HORVU3Hr1G026980.2	AT3G16310.1	21798944
AT3G43520.1	HORVU3Hr1G071060.1	AT3G16310.1	21798944
AT3G43520.1	HORVU7Hr1G070780.5	AT3G49530.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G112370.1	Barley	golgi, mitochondrion, plastid	42.4	91.09
GSMUA_Achr5P24090_001	Banana	extracellular, golgi, plasma membrane	39.17	78.7
AT2G26240.1	Thale cress	cytosol, extracellular	27.65	55.56
TraesCS2D01G507100.1	Wheat	golgi	49.77	52.43
TraesCS2B01G534700.1	Wheat	golgi	49.77	52.43
TraesCS2A01G506400.1	Wheat	plastid	49.77	52.43
EES12994	Sorghum	plastid	46.54	48.56
PGSC0003DMT400040174	Potato	cytosol, peroxisome, plastid	34.1	43.27
CDY11499	Canola	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	26.27	42.22
Zm00001d002028_P001	Maize	plastid	35.94	42.16
Zm00001d026478_P001	Maize	extracellular, plastid	29.49	41.03
CDX76725	Canola	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	26.27	39.04
KRH02516	Soybean	plastid	39.17	38.29
Bra007767.1-P	Field mustard	cytosol	23.04	38.17
KRH19425	Soybean	plastid	38.71	36.84
VIT_07s0130g00480.t01	Wine grape	plastid	39.63	34.96
CDY30952	Canola	plastid	33.18	32.88
Bra019447.1-P	Field mustard	plastid	33.18	32.88
Os04t0653100-01	Rice	plasma membrane, plastid	46.08	32.57
CDY44845	Canola	plastid	33.18	30.77
PGSC0003DMT400040171	Potato	plastid	34.56	30.49
PGSC0003DMT400040170	Potato	plastid	34.56	30.49
Solyc11g073240.1.1	Tomato	plastid	34.56	30.12
AT3G43520.1	Thale cress	plastid	32.72	29.58

Protein Annotations

EnsemblPlants:HORVU2Hr1G112380.1	EnsemblPlantsGene:HORVU2Hr1G112380	Gene3D:1.20.58.1140	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:TMEM14	ncoils:Coil	PANTHER:PTHR12668	PANTHER:PTHR12668:SF5	PFAM:PF03647	SEG:seg
TMHMM:TMhelix	UniParc:UPI000B47CA8F	UniProt:A0A287JGT3	MapMan:24.2.22	:	:

Description

No Description!

Coordinates

chrchr2H:-:725658018..725660553

Molecular Weight (calculated)

11601.6 Da

IEP (calculated)

10.991

GRAVY (calculated)

0.369

Length

217 amino acids

Sequence
(BLAST)

001: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
101: XXXEKMGDGL SMSQKLTLAY AALVGAGGVM GYMKSGSQKS LAAGGISALV LFFVHTQLPV RPVFASAIGL GISAALLSVM GSRFKKSGKI FPAGVVSLLS
201: LVMVGGYAHG IMRSSHV

Best Arabidopsis Sequence Match ( AT3G43520.1 )
(BLAST)

001: MADLILSSSS AQSSLLHVRP NHYLLNTSTA SPIRSVRFQN SNGFHPLAFA SGHRRLPLGA VVPSDSTKTI TSTITANCVD SGVKAVEVEP TIDYGGGGGI
101: GGDKFGGGGG GGDGNDDGGE DDKEESDGKK STPLSMSQKL TLGYAFLVGV GGLMGYLKSG SQKSLLAGGL SAAVLLYVFS QLPTKPVLAS TVGVVMAGAL
201: MYVMGTRYMR SKKIFPAGVV SIMSFIMTGG YIHGIMRSLH

Arabidopsis Description

FAX2Protein FATTY ACID EXPORT 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q94A32]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.