Subcellular Localization
min:
: max
Winner_takes_all: plastid, extracellular
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 4
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P24090_001 | Banana | extracellular, golgi, plasma membrane | 33.97 | 49.07 |
| HORVU2Hr1G112370.1 | Barley | golgi, mitochondrion, plastid | 31.41 | 48.51 |
| AT2G26240.1 | Thale cress | cytosol, extracellular | 28.21 | 40.74 |
| TraesCS2B01G534700.1 | Wheat | golgi | 42.31 | 32.04 |
| TraesCS2A01G506400.1 | Wheat | plastid | 42.31 | 32.04 |
| Zm00001d002028_P001 | Maize | plastid | 37.82 | 31.89 |
| CDY11499 | Canola | endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 27.56 | 31.85 |
| EES12994 | Sorghum | plastid | 42.31 | 31.73 |
| TraesCS2D01G507100.1 | Wheat | golgi | 41.67 | 31.55 |
| CDX76725 | Canola | endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 28.85 | 30.82 |
| HORVU2Hr1G112380.1 | Barley | peroxisome | 41.03 | 29.49 |
| PGSC0003DMT400040174 | Potato | cytosol, peroxisome, plastid | 31.41 | 28.66 |
| Bra007767.1-P | Field mustard | cytosol | 22.44 | 26.72 |
| KRH02516 | Soybean | plastid | 36.54 | 25.68 |
| KRH19425 | Soybean | plastid | 35.26 | 24.12 |
| VIT_07s0130g00480.t01 | Wine grape | plastid | 36.54 | 23.17 |
| CDY30952 | Canola | plastid | 31.41 | 22.37 |
| Bra019447.1-P | Field mustard | plastid | 31.41 | 22.37 |
| Os04t0653100-01 | Rice | plasma membrane, plastid | 42.31 | 21.5 |
| CDY44845 | Canola | plastid | 30.13 | 20.09 |
| Solyc11g073240.1.1 | Tomato | plastid | 32.05 | 20.08 |
| PGSC0003DMT400040170 | Potato | plastid | 31.41 | 19.92 |
| PGSC0003DMT400040171 | Potato | plastid | 31.41 | 19.92 |
| AT3G43520.1 | Thale cress | plastid | 29.49 | 19.17 |
Protein Annotations
| EnsemblPlants:Zm00001d026478_P001 | EnsemblPlants:Zm00001d026478_T001 | EnsemblPlantsGene:Zm00001d026478 | Gene3D:1.20.58.1140 | GO:GO:0005575 | GO:GO:0016020 |
| InterPro:TMEM14 | PANTHER:PTHR12668 | PANTHER:PTHR12668:SF5 | ProteinID:AQK46720.1 | SEG:seg | UniParc:UPI0008450F79 |
| UniProt:A0A1D6JG59 | MapMan:35.2 | : | : | : | : |
Description
Protein FATTY ACID EXPORT 2 chloroplastic
Coordinates
chr10:-:146709454..146711583
Molecular Weight (calculated)
16668.3 Da
IEP (calculated)
9.516
GRAVY (calculated)
0.281
Length
156 amino acids
Sequence
(BLAST)
(BLAST)
001: MGHELSMSQK LSLAYAALVG AGGVMGYMKS GSQKSSALVL YFVHTQLPVR PVFASSIGLG ISGRASVGDG VALQEVREDV PSWCRVPCIP GHVLLAFGVF
101: KGLLLFYSSV DDLLTVPTEN MVRHSITSEQ RSINVTKSTG VAVRYAVLRN PLQNTT
101: KGLLLFYSSV DDLLTVPTEN MVRHSITSEQ RSINVTKSTG VAVRYAVLRN PLQNTT
001: MADLILSSSS AQSSLLHVRP NHYLLNTSTA SPIRSVRFQN SNGFHPLAFA SGHRRLPLGA VVPSDSTKTI TSTITANCVD SGVKAVEVEP TIDYGGGGGI
101: GGDKFGGGGG GGDGNDDGGE DDKEESDGKK STPLSMSQKL TLGYAFLVGV GGLMGYLKSG SQKSLLAGGL SAAVLLYVFS QLPTKPVLAS TVGVVMAGAL
201: MYVMGTRYMR SKKIFPAGVV SIMSFIMTGG YIHGIMRSLH
101: GGDKFGGGGG GGDGNDDGGE DDKEESDGKK STPLSMSQKL TLGYAFLVGV GGLMGYLKSG SQKSLLAGGL SAAVLLYVFS QLPTKPVLAS TVGVVMAGAL
201: MYVMGTRYMR SKKIFPAGVV SIMSFIMTGG YIHGIMRSLH
Arabidopsis Description
FAX2Protein FATTY ACID EXPORT 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q94A32]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.