Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d004482_P001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G49530.1 | Zm00001d004482_P001 | AT5G19570.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d049540_P002 | Maize | cytosol | 75.3 | 75.64 |
| GSMUA_Achr11P... | Banana | cytosol | 18.83 | 66.14 |
| Os08t0157900-01 | Rice | nucleus, plasma membrane | 57.68 | 52.54 |
| VIT_15s0048g02310.t01 | Wine grape | cytosol | 12.8 | 51.52 |
| TraesCS7A01G299600.3 | Wheat | nucleus | 52.71 | 49.93 |
| TraesCS7D01G295100.1 | Wheat | nucleus | 52.11 | 49.78 |
| TraesCS7B01G187600.1 | Wheat | nucleus | 52.41 | 49.64 |
| HORVU7Hr1G070780.5 | Barley | nucleus | 52.26 | 49.29 |
| Zm00001d021423_P001 | Maize | nucleus | 13.86 | 42.2 |
| Zm00001d021424_P001 | Maize | nucleus | 14.91 | 40.41 |
| GSMUA_AchrUn_... | Banana | extracellular, plasma membrane | 40.36 | 35.31 |
| Bra036520.1-P | Field mustard | nucleus | 21.54 | 32.13 |
| CDY19828 | Canola | nucleus | 21.54 | 32.13 |
| Zm00001d047050_P001 | Maize | cytosol, nucleus, plastid | 14.61 | 31.19 |
| CDY05939 | Canola | nucleus | 21.69 | 31.1 |
| AT5G24590.2 | Thale cress | nucleus | 21.08 | 31.04 |
| CDY00208 | Canola | nucleus | 20.18 | 31.02 |
| Bra019599.1-P | Field mustard | nucleus | 20.18 | 31.02 |
| CDX88115 | Canola | cytosol | 20.48 | 30.7 |
| VIT_15s0048g02290.t01 | Wine grape | nucleus | 14.76 | 30.53 |
| Bra017980.1-P | Field mustard | nucleus | 21.08 | 30.24 |
| Bra009774.1-P | Field mustard | nucleus | 20.63 | 30.11 |
| CDX80455 | Canola | nucleus | 20.63 | 30.04 |
| CDY08139 | Canola | nucleus | 20.78 | 29.74 |
| Zm00001d030023_P001 | Maize | cytosol, nucleus, plastid | 15.21 | 29.45 |
| AT3G49530.1 | Thale cress | nucleus | 20.78 | 29.42 |
| AT4G35580.2 | Thale cress | nucleus | 23.64 | 29.4 |
| VIT_02s0025g03020.t01 | Wine grape | nucleus | 27.71 | 29.11 |
| VIT_15s0048g02320.t01 | Wine grape | nucleus | 15.21 | 28.61 |
| KRH72602 | Soybean | nucleus | 24.85 | 28.01 |
| KRH16970 | Soybean | nucleus | 24.1 | 27.12 |
| AT1G33060.2 | Thale cress | nucleus | 25.9 | 26.38 |
| VIT_16s0098g00760.t01 | Wine grape | mitochondrion | 25.0 | 25.78 |
| VIT_15s0048g02300.t01 | Wine grape | nucleus | 16.87 | 25.51 |
| CDY66161 | Canola | nucleus | 24.4 | 25.51 |
| CDY26922 | Canola | nucleus | 24.4 | 25.47 |
| Bra010193.1-P | Field mustard | nucleus | 24.4 | 25.47 |
| KRH53649 | Soybean | nucleus | 22.89 | 25.42 |
| Solyc06g073050.2.1 | Tomato | nucleus | 22.29 | 24.87 |
| KRH64275 | Soybean | nucleus | 22.44 | 24.71 |
| PGSC0003DMT400001498 | Potato | nucleus | 22.89 | 23.82 |
| PGSC0003DMT400069511 | Potato | nucleus | 22.44 | 23.65 |
| Zm00001d010227_P003 | Maize | nucleus | 15.51 | 23.15 |
| Solyc03g080090.2.1 | Tomato | nucleus | 21.84 | 23.05 |
| Zm00001d008308_P002 | Maize | plastid | 14.76 | 22.79 |
| VIT_15s0048g02270.t01 | Wine grape | nucleus | 21.39 | 22.61 |
| Zm00001d038227_P001 | Maize | nucleus | 15.06 | 22.12 |
| Zm00001d040318_P001 | Maize | cytosol, endoplasmic reticulum, nucleus | 17.17 | 22.05 |
| VIT_15s0048g02280.t01 | Wine grape | golgi, nucleus, plasma membrane | 16.57 | 21.53 |
| Zm00001d002945_P010 | Maize | cytosol | 12.8 | 20.83 |
| Zm00001d048493_P004 | Maize | nucleus | 21.39 | 20.67 |
| Zm00001d027395_P009 | Maize | nucleus | 19.58 | 19.58 |
| Zm00001d051879_P001 | Maize | nucleus | 17.62 | 17.81 |
| CDX87118 | Canola | nucleus | 21.08 | 16.83 |
| Zm00001d031898_P001 | Maize | plastid | 16.57 | 16.47 |
| Zm00001d049913_P001 | Maize | plastid | 15.66 | 16.3 |
Protein Annotations
| EntrezGene:100383037 | MapMan:15.5.17 | Gene3D:3.30.310.150 | ProteinID:AQK41462.1 | EMBL:BT066007 | UniProt:C0PCI8 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31989 |
| PANTHER:PTHR31989:SF102 | SUPFAM:SSF101941 | TMHMM:TMhelix | UniParc:UPI000194B230 | EnsemblPlantsGene:Zm00001d024543 | EnsemblPlants:Zm00001d024543_P001 |
| EnsemblPlants:Zm00001d024543_T001 | SEG:seg | : | : | : | : |
Description
NAC-transcription factor 61Protein NTM1-like 9
Coordinates
chr10:+:77529347..77533684
Molecular Weight (calculated)
73609.4 Da
IEP (calculated)
4.567
GRAVY (calculated)
-0.602
Length
664 amino acids
Sequence
(BLAST)
(BLAST)
001: MALWALPVGF RFHPTDEELV SHYLKGKITG QINSEAEVIP EIDICKCEPW DLPGKSLIRS DDPEWFFLAP KDRKYPNGSR SNRATVAGYW KATGPDRNIK
101: SKGDKSKQFT IGKKKTLVFH RGRAPKGERT GWIMHEYRTT EPQFESGKQG GYVLYRLFWK PEEKTERSSP KEMDRSGNSP TTIRSSRDNQ EANEEANTPL
201: NKKSLESALH DPIELPNSAE TPAGPRKMCL ADRNDNLVAT APVVSHIPFQ GHAAGVAKVD PSAAASAHFV NPQNGNDDCN NFMSDFTPIL PHENAFFTGT
301: QQGAFGFDGN GIMNHPDALD AFLNQTLVDT DEHSSTTSKV QYDSDIPTEF ANHWNMQDEH QDWWEKLDFE PYEPTLLPYD TTDLDVLSVD SGADSFNDLF
401: NVTGITLRPQ QLDSTVQPDC VFPDQGTALR RLKLQVVECG ESITKDESED EVSCVESPNY FDESVEFAAE KGVASYGDGA DSTGIVIRSR YPAPSSSSES
501: SFTQQGTAMR RLRLQLGLNE GTCPSSGDSS SCIVDESESQ QKAEIEEDAS TNLAGSVDNL PGNSHDDEQK DIPEHDAEMS VSGVKSVLRL RKTSAESLKD
601: VKQEDCLEPD GRAPMQRVGF QSSIIWLVLS VAVLLLLYCG VWMSMICILV RCFAHMGSWH QPDV
101: SKGDKSKQFT IGKKKTLVFH RGRAPKGERT GWIMHEYRTT EPQFESGKQG GYVLYRLFWK PEEKTERSSP KEMDRSGNSP TTIRSSRDNQ EANEEANTPL
201: NKKSLESALH DPIELPNSAE TPAGPRKMCL ADRNDNLVAT APVVSHIPFQ GHAAGVAKVD PSAAASAHFV NPQNGNDDCN NFMSDFTPIL PHENAFFTGT
301: QQGAFGFDGN GIMNHPDALD AFLNQTLVDT DEHSSTTSKV QYDSDIPTEF ANHWNMQDEH QDWWEKLDFE PYEPTLLPYD TTDLDVLSVD SGADSFNDLF
401: NVTGITLRPQ QLDSTVQPDC VFPDQGTALR RLKLQVVECG ESITKDESED EVSCVESPNY FDESVEFAAE KGVASYGDGA DSTGIVIRSR YPAPSSSSES
501: SFTQQGTAMR RLRLQLGLNE GTCPSSGDSS SCIVDESESQ QKAEIEEDAS TNLAGSVDNL PGNSHDDEQK DIPEHDAEMS VSGVKSVLRL RKTSAESLKD
601: VKQEDCLEPD GRAPMQRVGF QSSIIWLVLS VAVLLLLYCG VWMSMICILV RCFAHMGSWH QPDV
001: MNQIKNKTLP EMTTEQALLS MEALPLGFRF RPTDEELINH YLRLKINGRD LEVRVIPEID VCKWEPWDLP GLSVIKTDDQ EWFFFCPRDR KYPSGHRSNR
101: ATDIGYWKAT GKDRTIKSKK MIIGMKKTLV FYRGRAPRGE RTNWIMHEYR ATDKELDGTG PGQNPYVLCR LFHKPSDSCD PAHCEEIEKV NFTPTTTTRC
201: SPDDTSSEMV QETATSGVHA LDRSDDTERC LSDKGNNDVK PDVSVINNTS VNHAETSRAK DRNLGKTLVE ENPLLRDVPT LHGPILSEKS YYPGQSSIGF
301: ATSHMDSMYS SDFGNCDYGL HFQDGASEQD ASLTDVLDEV FHNHNESSND RKDFVLPNMM HWPGNTRLLS TEYPFLKDSV AFVDGSAEVS GSQQFVPDIL
401: ASRWVSEQNV DSKEAVEILS STGSSRTLTP LHNNVFGQYA SSSYAAIDPF NYNVNQPEQS SFEQSHVDRN ISPSNIFEFK ARSRENQRDL DSVVDQGTAP
501: RRIRLQIEQP LTPVTNKKER DADNYEEEDE VQSAMSKVVE EEPANLSAQG TAQRRIRLQT RLRKPLITLN NTKRNSNGRE GEASHRKCEM QEKEDISSSS
601: SWQKQKKSLV QFSSVVIIVA VIVVLVEIWK ESRDAKCSFL FHQLDSFKGM FT
101: ATDIGYWKAT GKDRTIKSKK MIIGMKKTLV FYRGRAPRGE RTNWIMHEYR ATDKELDGTG PGQNPYVLCR LFHKPSDSCD PAHCEEIEKV NFTPTTTTRC
201: SPDDTSSEMV QETATSGVHA LDRSDDTERC LSDKGNNDVK PDVSVINNTS VNHAETSRAK DRNLGKTLVE ENPLLRDVPT LHGPILSEKS YYPGQSSIGF
301: ATSHMDSMYS SDFGNCDYGL HFQDGASEQD ASLTDVLDEV FHNHNESSND RKDFVLPNMM HWPGNTRLLS TEYPFLKDSV AFVDGSAEVS GSQQFVPDIL
401: ASRWVSEQNV DSKEAVEILS STGSSRTLTP LHNNVFGQYA SSSYAAIDPF NYNVNQPEQS SFEQSHVDRN ISPSNIFEFK ARSRENQRDL DSVVDQGTAP
501: RRIRLQIEQP LTPVTNKKER DADNYEEEDE VQSAMSKVVE EEPANLSAQG TAQRRIRLQT RLRKPLITLN NTKRNSNGRE GEASHRKCEM QEKEDISSSS
601: SWQKQKKSLV QFSSVVIIVA VIVVLVEIWK ESRDAKCSFL FHQLDSFKGM FT
Arabidopsis Description
NAC014NAC014 [Source:UniProtKB/TrEMBL;Acc:A0A178WRQ2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.