Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d004482_P001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G49530.1 | Zm00001d004482_P001 | AT5G19570.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU79937 | Sorghum | nucleus | 86.99 | 86.6 |
| Zm00001d024543_P001 | Maize | nucleus | 75.64 | 75.3 |
| GSMUA_Achr11P... | Banana | cytosol | 19.52 | 68.25 |
| Os08t0157900-01 | Rice | nucleus, plasma membrane | 63.99 | 58.02 |
| TraesCS7A01G299600.3 | Wheat | nucleus | 58.55 | 55.21 |
| TraesCS7D01G295100.1 | Wheat | nucleus | 57.94 | 55.11 |
| HORVU7Hr1G070780.5 | Barley | nucleus | 57.94 | 54.4 |
| TraesCS7B01G187600.1 | Wheat | nucleus | 57.49 | 54.21 |
| VIT_15s0048g02310.t01 | Wine grape | cytosol | 13.01 | 52.12 |
| Zm00001d021423_P001 | Maize | nucleus | 14.52 | 44.04 |
| Zm00001d021424_P001 | Maize | nucleus | 15.88 | 42.86 |
| GSMUA_AchrUn_... | Banana | extracellular, plasma membrane | 43.42 | 37.81 |
| Zm00001d047050_P001 | Maize | cytosol, nucleus, plastid | 15.13 | 32.15 |
| VIT_15s0048g02290.t01 | Wine grape | nucleus | 15.43 | 31.78 |
| VIT_02s0025g03020.t01 | Wine grape | nucleus | 30.26 | 31.65 |
| AT5G24590.2 | Thale cress | nucleus | 21.48 | 31.49 |
| CDX88115 | Canola | cytosol | 21.03 | 31.38 |
| CDY19828 | Canola | nucleus | 21.03 | 31.24 |
| Bra036520.1-P | Field mustard | nucleus | 21.03 | 31.24 |
| AT4G35580.2 | Thale cress | nucleus | 24.96 | 30.9 |
| VIT_15s0048g02320.t01 | Wine grape | nucleus | 16.34 | 30.59 |
| Bra019599.1-P | Field mustard | nucleus | 19.97 | 30.56 |
| CDY00208 | Canola | nucleus | 19.97 | 30.56 |
| Bra009774.1-P | Field mustard | nucleus | 21.03 | 30.55 |
| Bra017980.1-P | Field mustard | nucleus | 21.33 | 30.45 |
| CDY05939 | Canola | nucleus | 21.33 | 30.45 |
| CDY08139 | Canola | nucleus | 21.18 | 30.17 |
| CDX80455 | Canola | nucleus | 20.57 | 29.82 |
| KRH72602 | Soybean | nucleus | 26.48 | 29.71 |
| AT3G49530.1 | Thale cress | nucleus | 20.73 | 29.21 |
| Zm00001d030023_P001 | Maize | cytosol, nucleus, plastid | 15.13 | 29.15 |
| KRH16970 | Soybean | nucleus | 25.57 | 28.64 |
| VIT_16s0098g00760.t01 | Wine grape | mitochondrion | 27.23 | 27.95 |
| KRH53649 | Soybean | nucleus | 25.11 | 27.76 |
| VIT_15s0048g02300.t01 | Wine grape | nucleus | 18.31 | 27.56 |
| AT1G33060.2 | Thale cress | nucleus | 26.63 | 26.99 |
| KRH64275 | Soybean | nucleus | 24.51 | 26.87 |
| Solyc06g073050.2.1 | Tomato | nucleus | 23.6 | 26.22 |
| CDY66161 | Canola | nucleus | 24.51 | 25.51 |
| CDY26922 | Canola | nucleus | 24.51 | 25.47 |
| Bra010193.1-P | Field mustard | nucleus | 24.51 | 25.47 |
| PGSC0003DMT400069511 | Potato | nucleus | 24.21 | 25.4 |
| PGSC0003DMT400001498 | Potato | nucleus | 23.75 | 24.61 |
| Solyc03g080090.2.1 | Tomato | nucleus | 22.54 | 23.69 |
| Zm00001d010227_P003 | Maize | nucleus | 15.88 | 23.6 |
| VIT_15s0048g02270.t01 | Wine grape | nucleus | 21.94 | 23.09 |
| Zm00001d008308_P002 | Maize | plastid | 14.98 | 23.02 |
| Zm00001d038227_P001 | Maize | nucleus | 15.28 | 22.35 |
| VIT_15s0048g02280.t01 | Wine grape | golgi, nucleus, plasma membrane | 17.25 | 22.31 |
| Zm00001d002945_P010 | Maize | cytosol | 13.31 | 21.57 |
| Zm00001d048493_P004 | Maize | nucleus | 22.24 | 21.4 |
| Zm00001d040318_P001 | Maize | cytosol, endoplasmic reticulum, nucleus | 16.64 | 21.28 |
| Zm00001d027395_P009 | Maize | nucleus | 20.73 | 20.63 |
| Zm00001d051879_P001 | Maize | nucleus | 18.0 | 18.11 |
| Zm00001d031898_P001 | Maize | plastid | 17.4 | 17.22 |
| Zm00001d049913_P001 | Maize | plastid | 16.19 | 16.77 |
| CDX87118 | Canola | nucleus | 20.88 | 16.59 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | UniProt:A0A1D6PVX4 | ProteinID:AQK50723.1 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom |
| InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31989 | PANTHER:PTHR31989:SF102 | SUPFAM:SSF101941 |
| TMHMM:TMhelix | UniParc:UPI0008437365 | EnsemblPlantsGene:Zm00001d049540 | EnsemblPlants:Zm00001d049540_P002 | EnsemblPlants:Zm00001d049540_T002 | SEG:seg |
Description
NAC-transcription factor 77Putative NAC domain transcription factor superfamily protein
Coordinates
chr4:+:33810679..33814574
Molecular Weight (calculated)
73708.2 Da
IEP (calculated)
4.523
GRAVY (calculated)
-0.741
Length
661 amino acids
Sequence
(BLAST)
(BLAST)
001: MVEMSVVELR TLPLGFRFHP TDEELVTHYL KGKITGRINS ESEVIPEIDV CKCEPWDLPD KSLIRSDDPE WFFFAPKDRK YPNGSRSNRA TEAGYWKATG
101: KDRIIKSKGD KRKQHTIGMK KTLVFHRGRA PKGERTGWIM HEYRTTEPEF ESGEQGGYVL YRLFRKQEEK TERSSPEEVD RSGYSPTPSR SSPDNLEANE
201: EANTPLNKES PESALHESPI ELPKSVETNG GSMTRWLADR NDNLMVTAPD VSHIPFHGHA AGVAKQVDPS VGASGHLVNP HNGNDDYNKF VSDFTPILPL
301: ENAFFTDIQQ GAFGFDGIMN PLDPLDAFLN QTLVDPDEHS STTSKVQYDS DIPTEFENHW NMKVEPQDDQ CWWANIGFEP DEPNPLLPCD TTDQDILSVD
401: SGADSFNELF NSMEETGIIV RPQQLDSTVQ PNHVFASQGN AARRLRLQVE SREIITKDES EDEVSCVLTP DCLNDSVEES TAEKDVASDG DEAESTGIVI
501: RSHHPAPRSS SESSFTQQGT AMQRLRLQSG LNKGQRPSTD DSSSCIIDEP GSQHKAEKAE IEEDASTNLA GSADDLPGNI HDDEQKNIPE HGAEMTSPEA
601: KSVLRLRKTS EEGNKDVKQE SCLEPHVRAP MQKGGFQSYI IWLVLPVALL LLLCVGTYGW V
101: KDRIIKSKGD KRKQHTIGMK KTLVFHRGRA PKGERTGWIM HEYRTTEPEF ESGEQGGYVL YRLFRKQEEK TERSSPEEVD RSGYSPTPSR SSPDNLEANE
201: EANTPLNKES PESALHESPI ELPKSVETNG GSMTRWLADR NDNLMVTAPD VSHIPFHGHA AGVAKQVDPS VGASGHLVNP HNGNDDYNKF VSDFTPILPL
301: ENAFFTDIQQ GAFGFDGIMN PLDPLDAFLN QTLVDPDEHS STTSKVQYDS DIPTEFENHW NMKVEPQDDQ CWWANIGFEP DEPNPLLPCD TTDQDILSVD
401: SGADSFNELF NSMEETGIIV RPQQLDSTVQ PNHVFASQGN AARRLRLQVE SREIITKDES EDEVSCVLTP DCLNDSVEES TAEKDVASDG DEAESTGIVI
501: RSHHPAPRSS SESSFTQQGT AMQRLRLQSG LNKGQRPSTD DSSSCIIDEP GSQHKAEKAE IEEDASTNLA GSADDLPGNI HDDEQKNIPE HGAEMTSPEA
601: KSVLRLRKTS EEGNKDVKQE SCLEPHVRAP MQKGGFQSYI IWLVLPVALL LLLCVGTYGW V
001: MNQIKNKTLP EMTTEQALLS MEALPLGFRF RPTDEELINH YLRLKINGRD LEVRVIPEID VCKWEPWDLP GLSVIKTDDQ EWFFFCPRDR KYPSGHRSNR
101: ATDIGYWKAT GKDRTIKSKK MIIGMKKTLV FYRGRAPRGE RTNWIMHEYR ATDKELDGTG PGQNPYVLCR LFHKPSDSCD PAHCEEIEKV NFTPTTTTRC
201: SPDDTSSEMV QETATSGVHA LDRSDDTERC LSDKGNNDVK PDVSVINNTS VNHAETSRAK DRNLGKTLVE ENPLLRDVPT LHGPILSEKS YYPGQSSIGF
301: ATSHMDSMYS SDFGNCDYGL HFQDGASEQD ASLTDVLDEV FHNHNESSND RKDFVLPNMM HWPGNTRLLS TEYPFLKDSV AFVDGSAEVS GSQQFVPDIL
401: ASRWVSEQNV DSKEAVEILS STGSSRTLTP LHNNVFGQYA SSSYAAIDPF NYNVNQPEQS SFEQSHVDRN ISPSNIFEFK ARSRENQRDL DSVVDQGTAP
501: RRIRLQIEQP LTPVTNKKER DADNYEEEDE VQSAMSKVVE EEPANLSAQG TAQRRIRLQT RLRKPLITLN NTKRNSNGRE GEASHRKCEM QEKEDISSSS
601: SWQKQKKSLV QFSSVVIIVA VIVVLVEIWK ESRDAKCSFL FHQLDSFKGM FT
101: ATDIGYWKAT GKDRTIKSKK MIIGMKKTLV FYRGRAPRGE RTNWIMHEYR ATDKELDGTG PGQNPYVLCR LFHKPSDSCD PAHCEEIEKV NFTPTTTTRC
201: SPDDTSSEMV QETATSGVHA LDRSDDTERC LSDKGNNDVK PDVSVINNTS VNHAETSRAK DRNLGKTLVE ENPLLRDVPT LHGPILSEKS YYPGQSSIGF
301: ATSHMDSMYS SDFGNCDYGL HFQDGASEQD ASLTDVLDEV FHNHNESSND RKDFVLPNMM HWPGNTRLLS TEYPFLKDSV AFVDGSAEVS GSQQFVPDIL
401: ASRWVSEQNV DSKEAVEILS STGSSRTLTP LHNNVFGQYA SSSYAAIDPF NYNVNQPEQS SFEQSHVDRN ISPSNIFEFK ARSRENQRDL DSVVDQGTAP
501: RRIRLQIEQP LTPVTNKKER DADNYEEEDE VQSAMSKVVE EEPANLSAQG TAQRRIRLQT RLRKPLITLN NTKRNSNGRE GEASHRKCEM QEKEDISSSS
601: SWQKQKKSLV QFSSVVIIVA VIVVLVEIWK ESRDAKCSFL FHQLDSFKGM FT
Arabidopsis Description
NAC014NAC014 [Source:UniProtKB/TrEMBL;Acc:A0A178WRQ2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.