Factsheet for VIT_15s0048g02270.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_15s0048g02310.t01	Wine grape	cytosol	17.99	68.48
VIT_15s0048g02320.t01	Wine grape	nucleus	35.19	62.61
VIT_15s0048g02300.t01	Wine grape	nucleus	42.04	60.14
VIT_15s0048g02290.t01	Wine grape	nucleus	26.59	52.02
GSMUA_Achr11P...	Banana	cytosol	15.13	50.26
VIT_17s0053g00740.t01	Wine grape	nucleus	14.49	38.24
GSMUA_Achr2P11810_001	Banana	cytosol, mitochondrion, nucleus, plastid	16.24	35.17
VIT_19s0085g00950.t01	Wine grape	nucleus	14.17	31.67
VIT_02s0025g03020.t01	Wine grape	nucleus	29.3	29.11
VIT_06s0080g00970.t01	Wine grape	nucleus	16.24	26.29
VIT_02s0012g01040.t01	Wine grape	nucleus	14.65	25.21
VIT_16s0098g00760.t01	Wine grape	mitochondrion	25.32	24.69
VIT_15s0048g02280.t01	Wine grape	golgi, nucleus, plasma membrane	19.9	24.46
GSMUA_Achr4P29170_001	Banana	nucleus	21.34	23.3
OQU79937	Sorghum	nucleus	24.04	22.74
GSMUA_Achr1P03560_001	Banana	nucleus	20.38	22.3
Zm00001d049540_P002	Maize	cytosol	23.09	21.94
Zm00001d024543_P001	Maize	nucleus	22.61	21.39
Os08t0157900-01	Rice	nucleus, plasma membrane	23.41	20.16
VIT_13s0019g05230.t01	Wine grape	nucleus	13.69	19.91
HORVU7Hr1G070780.5	Barley	nucleus	21.97	19.6
TraesCS7B01G187600.1	Wheat	nucleus	21.82	19.54
GSMUA_AchrUn_...	Banana	extracellular, plasma membrane	23.57	19.5
TraesCS7A01G299600.3	Wheat	nucleus	21.66	19.4
TraesCS7D01G295100.1	Wheat	nucleus	21.34	19.28
VIT_18s0001g01820.t01	Wine grape	nucleus	16.88	18.53
VIT_13s0019g05240.t01	Wine grape	cytosol, nucleus, plastid	16.4	18.43
VIT_04s0079g00280.t01	Wine grape	cytosol, nucleus, plasma membrane	18.31	17.22
VIT_04s0044g01220.t01	Wine grape	nucleus	14.01	15.71

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	ProteinID:CCB61322	ProteinID:CCB61322.1	UniProt:F6I305	EMBL:FN596739
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	InterPro:IPR003441
InterPro:IPR036093	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31989
PANTHER:PTHR31989:SF57	SUPFAM:SSF101941	TIGR:TC65020	TMHMM:TMhelix	UniParc:UPI000210A834	ArrayExpress:VIT_15s0048g02270
EnsemblPlantsGene:VIT_15s0048g02270	EnsemblPlants:VIT_15s0048g02270.t01	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr15:+:16452429..16456023

Molecular Weight (calculated)

69723.6 Da

IEP (calculated)

6.794

GRAVY (calculated)

-0.464

Length

628 amino acids

Sequence
(BLAST)

001: MSGGGMIGMA SESLPVGFRF HPTDEELVDH YLKLKILGMN SHVDIIPEVD VCKWEPWDLP VLSVIQTNDP EWFFFCPPDY KYPTGRRSNR ATEAGYWKPT
101: GKDRNIKSRA TKELLGTKKT LVFYRGRAPQ SVRTNWVMHE YRAAIASLPA NKAYVLCRLK RKTDENTGPD IPPETNVNGM LPELSIIQAT SLMNMEVDNS
201: STGIVFNMDG LANMVTLGGE PSHHASISAS NIGNYQVEEP TPEMDPLIQD LFNEPTFIPA DYDFSSDTEQ GPHLDLPFAN GFNNVCERTL FQDGSSEPDD
301: DVSRFLNTLI VDQDEHPFGE LASQRSSPVD SGNLRYGSIG KLSARPQSPL KGVYGKGGGS SSDTDTEVLQ VQYSQSRKTS SLINGVSHSK HCMPSPMARR
401: SYATSQLSSI NQHRKENKSS LHDESRRFAA PSIERLDNFV AQRVAPKSVK LEGNVSKTDI PQALTKLSCS MSKSEEKPVS TKAKEMTEYD SATDHNKDSI
501: KESKKDCEVT QKANVKLSPK SIWNVPVGSN QKGFFNCPET ASVSHEQSSS PDYLVNLLVG MLLFVILIAV MVLDINAKVS KPLQDIWVLQ AVWIVDVTLV
601: KTQEKQVGFG VWRYLKLKVG RILRNGHA

Best Arabidopsis Sequence Match ( AT4G35580.2 )
(BLAST)

001: MGAVSMESLP LGFRFRPTDE ELVNHYLRLK INGRHSDVRV IPDIDVCKWE PWDLPALSVI KTDDPEWFFF CPRDRKYPNG HRSNRATDSG YWKATGKDRS
101: IKSKKTLIGM KKTLVFYRGR APKGERTNWI MHEYRPTLKD LDGTSPGQSP YVLCRLFHKP DDRVNGVKSD EAAFTASNKY SPDDTSSDLV QETPSSDAAV
201: EKPSDYSGGC GYAHSNSTAD GTMIEAPEEN LWLSCDLEDQ KAPLPCMDSI YAGDFSYDEI GFQFQDGTSE PDVSLTELLE EVFNNPDDFS CEESISRENP
301: AVSPNGIFSS AKMLQSAAPE DAFFNDFMAF TDTDAEMAQL QYGSEGGASG WPSDTNSYYS DLVQQEQMIN HNTENNLTEG RGIKIRARQP QNRQSTGLIN
401: QGIAPRRIRL QLQSNSEVKE REEVNEGHTV IPEAKEAAAK YSEKSGSLVK PQIKLRARGT IGQVKGERFA DDEKFVVVTG TGAEQKETRR EAMEGGCNGN
501: GGCDGWGRDG YMEDTGEFMT HETQRERERE SNVV

Arabidopsis Description

NTL9NAC transcription factor-like 9 [Source:TAIR;Acc:AT4G35580]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.