Factsheet for HORVU7Hr1G070780.5

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU0Hr1G021100.1	Barley	cytosol, plastid	74.72	92.44
TraesCS7B01G187600.1	Wheat	nucleus	91.76	92.15
TraesCS7D01G295100.1	Wheat	nucleus	90.91	92.09
TraesCS7A01G299600.3	Wheat	nucleus	91.34	91.73
GSMUA_Achr11P...	Banana	cytosol	17.47	65.08
Os08t0157900-01	Rice	nucleus, plasma membrane	62.93	60.77
Zm00001d049540_P002	Maize	cytosol	54.4	57.94
OQU79937	Sorghum	nucleus	54.55	57.83
Zm00001d024543_P001	Maize	nucleus	49.29	52.26
VIT_15s0048g02310.t01	Wine grape	cytosol	11.79	50.3
HORVU5Hr1G087850.4	Barley	nucleus	13.49	38.62
GSMUA_AchrUn_...	Banana	extracellular, plasma membrane	38.92	36.1
HORVU0Hr1G000630.1	Barley	nucleus	12.64	33.46
Bra019599.1-P	Field mustard	nucleus	20.31	33.1
CDY00208	Canola	nucleus	20.31	33.1
AT5G24590.2	Thale cress	nucleus	20.45	31.93
Bra017980.1-P	Field mustard	nucleus	20.74	31.53
CDY08139	Canola	nucleus	20.6	31.25
Bra036520.1-P	Field mustard	nucleus	19.74	31.24
CDY19828	Canola	nucleus	19.74	31.24
VIT_15s0048g02290.t01	Wine grape	nucleus	14.2	31.15
CDX88115	Canola	cytosol	19.18	30.47
CDY05939	Canola	nucleus	20.03	30.45
HORVU5Hr1G087840.5	Barley	nucleus, plastid	14.2	30.12
Bra009774.1-P	Field mustard	nucleus	19.32	29.89
AT3G49530.1	Thale cress	nucleus	19.6	29.42
CDX80455	Canola	nucleus	19.03	29.39
AT4G35580.2	Thale cress	nucleus	21.45	28.28
VIT_15s0048g02320.t01	Wine grape	nucleus	14.06	28.05
HORVU1Hr1G049840.3	Barley	cytosol	14.2	28.01
VIT_02s0025g03020.t01	Wine grape	nucleus	25.0	27.85
KRH72602	Soybean	nucleus	23.01	27.5
KRH16970	Soybean	nucleus	22.44	26.78
VIT_16s0098g00760.t01	Wine grape	mitochondrion	24.43	26.71
HORVU2Hr1G045580.1	Barley	nucleus	13.21	26.57
HORVU7Hr1G033990.1	Barley	nucleus	13.21	26.57
KRH64275	Soybean	nucleus	22.3	26.04
KRH53649	Soybean	nucleus	22.02	25.92
AT1G33060.2	Thale cress	nucleus	23.3	25.15
Solyc06g073050.2.1	Tomato	nucleus	20.88	24.71
VIT_15s0048g02300.t01	Wine grape	nucleus	15.2	24.37
PGSC0003DMT400001498	Potato	nucleus	21.88	24.14
PGSC0003DMT400069511	Potato	nucleus	21.59	24.13
HORVU3Hr1G036380.1	Barley	cytosol	16.19	23.65
CDY66161	Canola	nucleus	21.16	23.46
CDY26922	Canola	nucleus	21.16	23.43
Bra010193.1-P	Field mustard	nucleus	21.16	23.43
HORVU1Hr1G065570.2	Barley	nucleus	13.92	22.74
Solyc03g080090.2.1	Tomato	nucleus	20.03	22.42
HORVU2Hr1G127550.1	Barley	nucleus	12.78	22.39
HORVU2Hr1G127510.1	Barley	nucleus	12.78	22.39
VIT_15s0048g02270.t01	Wine grape	nucleus	19.6	21.97
VIT_15s0048g02280.t01	Wine grape	golgi, nucleus, plasma membrane	15.34	21.14
HORVU4Hr1G085320.1	Barley	cytosol, nucleus, peroxisome	18.47	18.87
HORVU7Hr1G060310.1	Barley	nucleus	15.62	17.03
CDX87118	Canola	nucleus	19.74	16.71
HORVU6Hr1G093050.4	Barley	cytosol, golgi, nucleus	15.06	16.54
HORVU5Hr1G074230.30	Barley	nucleus, plastid	15.06	13.98
HORVU5Hr1G086730.1	Barley	nucleus	3.12	7.24
HORVU5Hr1G086780.2	Barley	cytosol, nucleus	1.7	5.41

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	EMBL:AK365939	UniProt:F2DPX1	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:HORVU7Hr1G070780	EnsemblPlants:HORVU7Hr1G070780.5	InterPro:IPR003441
InterPro:IPR036093	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31989
PANTHER:PTHR31989:SF102	SUPFAM:SSF101941	TMHMM:TMhelix	UniParc:UPI0002006C47	SEG:seg	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DPX1]

Coordinates

chrchr7H:-:385319909..385324140

Molecular Weight (calculated)

78254.6 Da

IEP (calculated)

4.599

GRAVY (calculated)

-0.707

Length

704 amino acids

Sequence
(BLAST)

001: MTVMELKALP LGFRFHPTDE ELVRHYLKGK ITGQIKNEVE VIPEIDVCKC EPWDLPDKAL IRSEDPEWFF FAPKDRKYPN GSRSNRATEA GYWKATGKDR
101: VIKSKGEKKK QHMIGMKKTL VFHRGRAPKG ERTGWIMHEY RTTEPEFESG EQGGYVLYRL FQKQVEKTER SIPEEMDRSG YSPTPSRSTP DNMEANEEAI
201: TLINKESPES GLHGCPIELP CTIETLGAPV TRWLADRNGN PGTDEANDVG MPFHRGVDES PKQADLSVGS LAHLIDSQTK NLGSHEFATV SAPMLPDDHL
301: DNLLLHLTHN SVEDFLNETI ADPDELSSTA CKVQYDSDNG IMQAQGDLLY DDPNWFGNFL SDDTNPQPSG LYENAPLLPY GTNPDVLSMD SGDESLQDLF
401: NSMDDSSWQN DVWSNGFGFN PMHQQLQSTV HPNYIFSQQG IARRRLRLLD SLSDVNVESR ESMTRDEHED EESDIVTSKY RSESVESSAD VDESESTGVT
501: IMSRRRALTK SVPSDRDDAE STGITIMGRR SAPSSNAPSD EADAEATGIN IVSRRTAPSS STDNSFTTEQ GTAVRRLRLQ SNLDAGSCSS VDGLSSCIIE
601: HGSENEGLEA EIDEHVDTNF LDDVGFAGNS HADEHMYMPD HEANSLTRLR KTAEKSDKEN KQECGPQSHV RAPRKRGGFA ARMILPVLSV ALLVLVSVGV
701: YGWA

Best Arabidopsis Sequence Match ( AT1G33060.1 )
(BLAST)

001: MNQIKNKTLP EMTTEQALLS MEALPLGFRF RPTDEELINH YLRLKINGRD LEVRVIPEID VCKWEPWDLP GLSVIKTDDQ EWFFFCPRDR KYPSGHRSNR
101: ATDIGYWKAT GKDRTIKSKK MIIGMKKTLV FYRGRAPRGE RTNWIMHEYR ATDKELDGTG PGQNPYVLCR LFHKPSDSCD PAHCEEIEKV NFTPTTTTRC
201: SPDDTSSEMV QETATSGVHA LDRSDDTERC LSDKGNNDVK PDVSVINNTS VNHAETSRAK DRNLGKTLVE ENPLLRDVPT LHGPILSEKS YYPGQSSIGF
301: ATSHMDSMYS SDFGNCDYGL HFQDGASEQD ASLTDVLDEV FHNHNESSND RKDFVLPNMM HWPGNTRLLS TEYPFLKDSV AFVDGSAEVS GSQQFVPDIL
401: ASRWVSEQNV DSKEAVEILS STGSSRTLTP LHNNVFGQYA SSSYAAIDPF NYNVNQPEQS SFEQSHVDRN ISPSNIFEFK ARSRENQRDL DSVVDQGTAP
501: RRIRLQIEQP LTPVTNKKER DADNYEEEDE VQSAMSKVVE EEPANLSAQG TAQRRIRLQT RLRKPLITLN NTKRNSNGRE GEASHRKEKE DISSSSSWQK
601: QKKSLVQFSS VVIIVAVIVV LVEIWKESRD AKCSFLFHQL DSFKGMFT

Arabidopsis Description

NAC014NAC014 [Source:UniProtKB/TrEMBL;Acc:A0A178WRQ2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.