Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra010193.1-P | Field mustard | nucleus | 97.64 | 97.48 |
| CDY26922 | Canola | nucleus | 97.64 | 97.48 |
| AT1G33060.2 | Thale cress | nucleus | 73.54 | 71.63 |
| GSMUA_Achr11P... | Banana | cytosol | 15.43 | 51.85 |
| CDY70627 | Canola | cytosol | 13.07 | 50.3 |
| CDY71253 | Canola | cytosol | 13.54 | 48.31 |
| CDY41351 | Canola | plastid | 12.28 | 46.71 |
| CDX95832 | Canola | nucleus | 15.43 | 43.36 |
| CDX92153 | Canola | nucleus | 15.43 | 43.36 |
| GSMUA_Achr2P11810_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 18.27 | 40.0 |
| CDX86970 | Canola | nucleus | 19.84 | 39.87 |
| CDY19828 | Canola | nucleus | 25.2 | 35.96 |
| CDX88115 | Canola | cytosol | 24.88 | 35.67 |
| CDX80455 | Canola | nucleus | 24.88 | 34.65 |
| CDY10502 | Canola | nucleus | 16.38 | 33.88 |
| VIT_02s0025g03020.t01 | Wine grape | nucleus | 33.39 | 33.54 |
| CDY08139 | Canola | nucleus | 24.41 | 33.41 |
| CDY05939 | Canola | nucleus | 23.94 | 32.83 |
| CDX77674 | Canola | nucleus | 14.65 | 32.75 |
| CDY63046 | Canola | nucleus | 14.8 | 32.41 |
| CDY42413 | Canola | nucleus | 15.75 | 32.36 |
| CDY00208 | Canola | nucleus | 21.89 | 32.18 |
| CDX67739 | Canola | nucleus | 15.75 | 32.15 |
| CDX90431 | Canola | nucleus | 14.33 | 31.82 |
| CDY01508 | Canola | nucleus | 14.17 | 31.47 |
| CDY59580 | Canola | nucleus | 14.49 | 31.29 |
| CDX78816 | Canola | nucleus | 14.33 | 31.16 |
| CDY44498 | Canola | nucleus | 14.33 | 31.16 |
| CDY67205 | Canola | nucleus | 14.02 | 31.12 |
| CDY66060 | Canola | nucleus | 14.02 | 31.12 |
| CDX87703 | Canola | nucleus | 14.33 | 30.95 |
| CDY46459 | Canola | nucleus | 14.8 | 30.92 |
| CDX84070 | Canola | nucleus | 13.7 | 30.74 |
| CDX70995 | Canola | cytosol | 15.43 | 29.34 |
| CDX92368 | Canola | cytosol | 15.43 | 29.25 |
| CDX88803 | Canola | cytosol | 15.12 | 28.49 |
| CDY09128 | Canola | cytosol | 15.28 | 28.28 |
| GSMUA_Achr4P29170_001 | Banana | nucleus | 25.51 | 28.17 |
| CDY35676 | Canola | cytoskeleton, cytosol, nucleus | 15.12 | 27.99 |
| CDX71459 | Canola | cytosol, golgi, nucleus | 15.12 | 27.83 |
| CDY04487 | Canola | cytosol | 15.12 | 27.83 |
| CDY34714 | Canola | cytosol, golgi, nucleus | 14.65 | 27.51 |
| CDY20351 | Canola | cytosol, golgi, nucleus | 14.65 | 27.43 |
| CDY44793 | Canola | nucleus | 14.17 | 25.71 |
| GSMUA_Achr1P03560_001 | Banana | nucleus | 22.83 | 25.26 |
| CDX84485 | Canola | nucleus | 13.7 | 25.14 |
| CDY43785 | Canola | nucleus | 13.54 | 25.0 |
| CDX81124 | Canola | nucleus | 13.39 | 24.85 |
| OQU79937 | Sorghum | nucleus | 25.98 | 24.85 |
| Zm00001d049540_P002 | Maize | cytosol | 25.51 | 24.51 |
| Zm00001d024543_P001 | Maize | nucleus | 25.51 | 24.4 |
| CDY34716 | Canola | nucleus | 11.18 | 24.15 |
| CDY41352 | Canola | nucleus | 15.75 | 23.75 |
| CDY00676 | Canola | nucleus | 15.91 | 23.6 |
| CDY28745 | Canola | cytosol | 17.17 | 22.8 |
| CDY49932 | Canola | nucleus | 17.17 | 22.76 |
| CDY41353 | Canola | nucleus | 15.75 | 22.68 |
| CDX70745 | Canola | cytosol | 17.48 | 22.47 |
| CDX78734 | Canola | cytosol | 17.32 | 22.45 |
| CDY43143 | Canola | nucleus | 16.85 | 22.38 |
| CDY16943 | Canola | nucleus | 17.48 | 22.33 |
| CDY08601 | Canola | nucleus, plastid | 15.91 | 22.2 |
| CDY00946 | Canola | nucleus | 15.75 | 22.17 |
| CDX73921 | Canola | cytosol, nucleus, plastid | 15.91 | 22.15 |
| Os08t0157900-01 | Rice | nucleus, plasma membrane | 25.04 | 21.81 |
| TraesCS7D01G295100.1 | Wheat | nucleus | 23.62 | 21.58 |
| TraesCS7A01G299600.3 | Wheat | nucleus | 23.62 | 21.4 |
| TraesCS7B01G187600.1 | Wheat | nucleus | 23.46 | 21.26 |
| CDY61762 | Canola | cytosol, nucleus, plastid | 17.32 | 21.19 |
| HORVU7Hr1G070780.5 | Barley | nucleus | 23.46 | 21.16 |
| CDY14157 | Canola | cytosol, nucleus, vacuole | 17.17 | 21.12 |
| CDX73920 | Canola | nucleus | 14.65 | 20.81 |
| CDX73305 | Canola | nucleus | 17.01 | 20.73 |
| CDY00677 | Canola | nucleus | 14.33 | 20.45 |
| GSMUA_AchrUn_... | Banana | extracellular, plasma membrane | 24.41 | 20.42 |
| CDX91785 | Canola | nucleus | 17.17 | 20.22 |
| CDX93723 | Canola | nucleus | 17.64 | 20.14 |
| CDY58437 | Canola | cytosol, nucleus, plastid | 17.64 | 20.14 |
| CDY60870 | Canola | nucleus | 18.27 | 20.1 |
| CDX69911 | Canola | nucleus | 13.86 | 20.09 |
| CDY21575 | Canola | nucleus | 13.7 | 20.05 |
| CDX70227 | Canola | cytosol, nucleus, vacuole | 17.32 | 19.86 |
| CDY25752 | Canola | nucleus | 15.91 | 19.84 |
| CDY28401 | Canola | cytosol, nucleus, plastid | 17.01 | 19.78 |
| CDY11289 | Canola | cytosol, nucleus, vacuole | 17.48 | 19.61 |
| CDX78356 | Canola | nucleus | 11.18 | 19.56 |
| CDY48632 | Canola | cytosol, nucleus, plastid | 17.32 | 19.54 |
| CDY16427 | Canola | nucleus | 18.27 | 19.5 |
| CDY44853 | Canola | cytosol, nucleus, vacuole | 17.17 | 19.46 |
| CDY70628 | Canola | golgi | 12.13 | 19.44 |
| CDX87118 | Canola | nucleus | 25.04 | 19.11 |
| CDY41354 | Canola | cytosol, nucleus, plastid | 16.06 | 18.99 |
| CDY28397 | Canola | nucleus | 17.17 | 18.86 |
| CDY12515 | Canola | plastid | 16.06 | 18.72 |
| CDX73304 | Canola | nucleus | 17.01 | 18.52 |
| CDY21216 | Canola | nucleus | 11.81 | 17.44 |
| CDX86969 | Canola | cytosol | 2.05 | 12.15 |
| CDX69392 | Canola | nucleus | 6.46 | 9.58 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078JK12 | UniProt:A0A078JK12 | EnsemblPlants:CDY66161 | ProteinID:CDY66161 |
| ProteinID:CDY66161.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 |
| EnsemblPlantsGene:GSBRNA2T00052195001 | InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 |
| PFscan:PS51005 | PANTHER:PTHR31989 | PANTHER:PTHR31989:SF114 | SUPFAM:SSF101941 | TMHMM:TMhelix | UniParc:UPI0004EC2F82 |
| SEG:seg | : | : | : | : | : |
Description
BnaCnng49700DBnaCnng49700D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JK12]
Coordinates
chrLK035113:-:5969..8574
Molecular Weight (calculated)
71927.1 Da
IEP (calculated)
6.292
GRAVY (calculated)
-0.710
Length
635 amino acids
Sequence
(BLAST)
(BLAST)
001: MATETQATLS MESLPLGFRF RPTDEELINH YLRLKINGRD LEVRVIPEID VCKWEPWDLP GLSVIKTDDQ EWFFFCPRDR KYPSGHRSNR ATDIGYWKAT
101: GKDRTIKSKK MIIGMKKTLV FYRGRAPRGE RTNWIMHEYR ATDKDLDGTG PGQSPYVLCR LFHKPSDVAN CDEVENVNAT PTTTRCSRED NSSEMVQETA
201: TSRVHAQNIS DDTERCPSDK GSDVKPDAPV IKTENHGETS RAKDRGKSIV EESPFARDFS SLYGPSFDQT SYTPVPSSIG FPASHMDSMY SSDFGNCHYG
301: LHFQDGAAIQ DESLADVLDE VFHNHNQSST EPKDFALPKM MHWSFPRDTF GFVNGSAEAS FPQFAPDVGA SRLASDHYVD SKEAVEIQSS SGSSRTVTPL
401: HSNVLGQHPP VSYATMDPFN SNVNQPEQEQ LPVDRNIILS EFNARARETQ TDLDFVVNQG TAPRRIRLQI EQPFTPVNNE KERDVDNHEE EEVQSAMTMI
501: VEEDEKCFLD KDKSRAQGHA SLSEATNLNT QGTAHRRIRL QTRIRKLPII PKNTGRDSNH SEEVAMHSKE KEDVSASSSS SWQQHKLMRK RMVKCSSMVV
601: IMAVMVLLVG IWKESRYAKC SFLFHQLDSF KGMFT
101: GKDRTIKSKK MIIGMKKTLV FYRGRAPRGE RTNWIMHEYR ATDKDLDGTG PGQSPYVLCR LFHKPSDVAN CDEVENVNAT PTTTRCSRED NSSEMVQETA
201: TSRVHAQNIS DDTERCPSDK GSDVKPDAPV IKTENHGETS RAKDRGKSIV EESPFARDFS SLYGPSFDQT SYTPVPSSIG FPASHMDSMY SSDFGNCHYG
301: LHFQDGAAIQ DESLADVLDE VFHNHNQSST EPKDFALPKM MHWSFPRDTF GFVNGSAEAS FPQFAPDVGA SRLASDHYVD SKEAVEIQSS SGSSRTVTPL
401: HSNVLGQHPP VSYATMDPFN SNVNQPEQEQ LPVDRNIILS EFNARARETQ TDLDFVVNQG TAPRRIRLQI EQPFTPVNNE KERDVDNHEE EEVQSAMTMI
501: VEEDEKCFLD KDKSRAQGHA SLSEATNLNT QGTAHRRIRL QTRIRKLPII PKNTGRDSNH SEEVAMHSKE KEDVSASSSS SWQQHKLMRK RMVKCSSMVV
601: IMAVMVLLVG IWKESRYAKC SFLFHQLDSF KGMFT
001: MNQIKNKTLP EMTTEQALLS MEALPLGFRF RPTDEELINH YLRLKINGRD LEVRVIPEID VCKWEPWDLP GLSVIKTDDQ EWFFFCPRDR KYPSGHRSNR
101: ATDIGYWKAT GKDRTIKSKK MIIGMKKTLV FYRGRAPRGE RTNWIMHEYR ATDKELDGTG PGQNPYVLCR LFHKPSDSCD PAHCEEIEKV NFTPTTTTRC
201: SPDDTSSEMV QETATSGVHA LDRSDDTERC LSDKGNNDVK PDVSVINNTS VNHAETSRAK DRNLGKTLVE ENPLLRDVPT LHGPILSEKS YYPGQSSIGF
301: ATSHMDSMYS SDFGNCDYGL HFQDGASEQD ASLTDVLDEV FHNHNESSND RKDFVLPNMM HWPGNTRLLS TEYPFLKDSV AFVDGSAEVS GSQQFVPDIL
401: ASRWVSEQNV DSKEAVEILS STGSSRTLTP LHNNVFGQYA SSSYAAIDPF NYNVNQPEQS SFEQSHVDRN ISPSNIFEFK ARSRENQRDL DSVVDQGTAP
501: RRIRLQIEQP LTPVTNKKER DADNYEEEDE VQSAMSKVVE EEPANLSAQG TAQRRIRLQT RLRKPLITLN NTKRNSNGRE GEASHRKEKE DISSSSSWQK
601: QKKSLVQFSS VVIIVAVIVV LVEIWKESRD AKCSFLFHQL DSFKGMFT
101: ATDIGYWKAT GKDRTIKSKK MIIGMKKTLV FYRGRAPRGE RTNWIMHEYR ATDKELDGTG PGQNPYVLCR LFHKPSDSCD PAHCEEIEKV NFTPTTTTRC
201: SPDDTSSEMV QETATSGVHA LDRSDDTERC LSDKGNNDVK PDVSVINNTS VNHAETSRAK DRNLGKTLVE ENPLLRDVPT LHGPILSEKS YYPGQSSIGF
301: ATSHMDSMYS SDFGNCDYGL HFQDGASEQD ASLTDVLDEV FHNHNESSND RKDFVLPNMM HWPGNTRLLS TEYPFLKDSV AFVDGSAEVS GSQQFVPDIL
401: ASRWVSEQNV DSKEAVEILS STGSSRTLTP LHNNVFGQYA SSSYAAIDPF NYNVNQPEQS SFEQSHVDRN ISPSNIFEFK ARSRENQRDL DSVVDQGTAP
501: RRIRLQIEQP LTPVTNKKER DADNYEEEDE VQSAMSKVVE EEPANLSAQG TAQRRIRLQT RLRKPLITLN NTKRNSNGRE GEASHRKEKE DISSSSSWQK
601: QKKSLVQFSS VVIIVAVIVV LVEIWKESRD AKCSFLFHQL DSFKGMFT
Arabidopsis Description
NAC014NAC014 [Source:UniProtKB/TrEMBL;Acc:A0A178WRQ2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.