Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX78356 | Canola | nucleus | 85.09 | 80.17 |
| CDY44793 | Canola | nucleus | 73.68 | 72.0 |
| CDY21575 | Canola | nucleus | 79.24 | 62.44 |
| CDX69911 | Canola | nucleus | 78.95 | 61.64 |
| Solyc03g078120.2.1 | Tomato | cytosol | 25.73 | 58.67 |
| CDY70627 | Canola | cytosol | 27.19 | 56.36 |
| CDX84485 | Canola | nucleus | 53.51 | 52.89 |
| CDY43785 | Canola | nucleus | 52.63 | 52.33 |
| AT5G09330.5 | Thale cress | nucleus | 74.27 | 51.94 |
| CDY41351 | Canola | plastid | 23.68 | 48.5 |
| HORVU0Hr1G000630.1 | Barley | nucleus | 33.92 | 43.61 |
| CDY71253 | Canola | cytosol | 22.22 | 42.7 |
| KRH43549 | Soybean | cytosol | 39.77 | 42.11 |
| TraesCS5A01G220900.1 | Wheat | cytosol | 28.36 | 41.63 |
| GSMUA_Achr10P... | Banana | nucleus | 30.99 | 41.25 |
| CDX92153 | Canola | nucleus | 26.02 | 39.38 |
| CDX95832 | Canola | nucleus | 26.02 | 39.38 |
| KRH59567 | Soybean | cytosol, golgi, nucleus | 33.63 | 36.28 |
| HORVU7Hr1G033990.1 | Barley | nucleus | 35.67 | 34.86 |
| HORVU2Hr1G045580.1 | Barley | nucleus | 35.38 | 34.57 |
| TraesCS1D01G266500.1 | Wheat | nucleus | 38.6 | 33.42 |
| Zm00001d002945_P010 | Maize | cytosol | 38.3 | 32.11 |
| OQU82661 | Sorghum | nucleus | 38.01 | 32.1 |
| Zm00001d010227_P003 | Maize | nucleus | 40.94 | 31.46 |
| CDY46459 | Canola | nucleus | 27.78 | 31.25 |
| TraesCS6B01G033000.1 | Wheat | nucleus | 33.04 | 30.96 |
| GSMUA_Achr7P23330_001 | Banana | nucleus | 36.84 | 30.88 |
| HORVU1Hr1G065570.2 | Barley | nucleus | 38.89 | 30.86 |
| KXG22035 | Sorghum | nucleus | 40.06 | 30.86 |
| TraesCS1B01G277300.1 | Wheat | nucleus | 38.6 | 30.56 |
| Zm00001d038227_P001 | Maize | nucleus | 40.35 | 30.53 |
| TraesCS1A01G266300.2 | Wheat | nucleus | 37.72 | 30.07 |
| TraesCS2D01G567000.1 | Wheat | cytosol | 35.67 | 30.05 |
| TraesCS6A01G003800.1 | Wheat | nucleus | 33.04 | 29.97 |
| CDY10502 | Canola | nucleus | 26.61 | 29.64 |
| KRH64046 | Soybean | nucleus | 41.81 | 29.61 |
| CDX67739 | Canola | nucleus | 26.9 | 29.58 |
| TraesCS2B01G616900.1 | Wheat | nucleus | 35.09 | 29.56 |
| TraesCSU01G137200.2 | Wheat | cytosol, nucleus, plastid | 35.09 | 29.56 |
| CDY42413 | Canola | nucleus | 26.32 | 29.13 |
| CDX90431 | Canola | nucleus | 24.27 | 29.02 |
| CDY01508 | Canola | nucleus | 24.27 | 29.02 |
| CDX77674 | Canola | nucleus | 23.98 | 28.87 |
| HORVU2Hr1G127510.1 | Barley | nucleus | 33.92 | 28.86 |
| HORVU2Hr1G127550.1 | Barley | nucleus | 33.92 | 28.86 |
| CDY63046 | Canola | nucleus | 24.27 | 28.62 |
| GSMUA_Achr11P... | Banana | nucleus | 36.55 | 28.54 |
| Os05t0426200-02 | Rice | nucleus | 37.43 | 28.51 |
| CDY44498 | Canola | nucleus | 24.27 | 28.42 |
| CDX78816 | Canola | nucleus | 23.98 | 28.08 |
| CDX86970 | Canola | nucleus | 25.73 | 27.85 |
| CDX84070 | Canola | nucleus | 22.81 | 27.56 |
| CDY59580 | Canola | nucleus | 23.68 | 27.55 |
| CDY66060 | Canola | nucleus | 22.81 | 27.27 |
| CDY67205 | Canola | nucleus | 22.81 | 27.27 |
| KRH53893 | Soybean | nucleus | 40.06 | 27.24 |
| CDX87703 | Canola | nucleus | 23.39 | 27.21 |
| VIT_04s0044g01220.t01 | Wine grape | nucleus | 42.98 | 26.25 |
| CDY00676 | Canola | nucleus | 32.46 | 25.93 |
| CDX70995 | Canola | cytosol | 24.85 | 25.45 |
| CDY41352 | Canola | nucleus | 31.29 | 25.42 |
| CDY09128 | Canola | cytosol | 25.44 | 25.36 |
| CDY35676 | Canola | cytoskeleton, cytosol, nucleus | 25.44 | 25.36 |
| PGSC0003DMT400073779 | Potato | nucleus | 40.06 | 25.28 |
| CDX88803 | Canola | cytosol | 24.85 | 25.22 |
| CDX92368 | Canola | cytosol | 24.56 | 25.07 |
| CDY20351 | Canola | cytosol, golgi, nucleus | 24.85 | 25.07 |
| CDY34714 | Canola | cytosol, golgi, nucleus | 24.56 | 24.85 |
| CDY41353 | Canola | nucleus | 31.87 | 24.72 |
| CDX71459 | Canola | cytosol, golgi, nucleus | 24.85 | 24.64 |
| CDY04487 | Canola | cytosol | 24.85 | 24.64 |
| CDY00946 | Canola | nucleus | 31.58 | 23.95 |
| CDX73920 | Canola | nucleus | 31.29 | 23.94 |
| CDY00677 | Canola | nucleus | 30.99 | 23.82 |
| CDY08601 | Canola | nucleus, plastid | 31.58 | 23.74 |
| CDX73921 | Canola | cytosol, nucleus, plastid | 31.58 | 23.68 |
| CDY58437 | Canola | cytosol, nucleus, plastid | 38.3 | 23.56 |
| CDY61762 | Canola | cytosol, nucleus, plastid | 35.67 | 23.51 |
| CDX70227 | Canola | cytosol, nucleus, vacuole | 38.01 | 23.47 |
| CDY14157 | Canola | cytosol, nucleus, vacuole | 35.09 | 23.26 |
| CDY44853 | Canola | cytosol, nucleus, vacuole | 37.43 | 22.86 |
| CDY11289 | Canola | cytosol, nucleus, vacuole | 37.72 | 22.79 |
| CDY41354 | Canola | cytosol, nucleus, plastid | 34.21 | 21.79 |
| Solyc11g005920.1.1 | Tomato | nucleus | 42.11 | 20.96 |
| CDY25752 | Canola | nucleus | 30.7 | 20.63 |
| CDY00208 | Canola | nucleus | 26.02 | 20.6 |
| CDY28745 | Canola | cytosol | 28.07 | 20.08 |
| CDY43143 | Canola | nucleus | 28.07 | 20.08 |
| CDX73305 | Canola | nucleus | 30.41 | 19.96 |
| CDY70628 | Canola | golgi | 22.81 | 19.7 |
| CDY49932 | Canola | nucleus | 27.49 | 19.62 |
| CDX78734 | Canola | cytosol | 28.07 | 19.59 |
| CDY16943 | Canola | nucleus | 27.78 | 19.11 |
| CDY34716 | Canola | nucleus | 16.37 | 19.05 |
| CDX70745 | Canola | cytosol | 27.49 | 19.03 |
| CDX91785 | Canola | nucleus | 29.82 | 18.92 |
| CDY12515 | Canola | plastid | 30.12 | 18.9 |
| CDY19828 | Canola | nucleus | 24.56 | 18.88 |
| CDY05939 | Canola | nucleus | 25.44 | 18.79 |
| CDX88115 | Canola | cytosol | 24.27 | 18.74 |
| CDY28401 | Canola | cytosol, nucleus, plastid | 29.82 | 18.68 |
| CDX93723 | Canola | nucleus | 29.82 | 18.35 |
| CDY08139 | Canola | nucleus | 24.85 | 18.32 |
| CDX80455 | Canola | nucleus | 24.27 | 18.2 |
| CDY28397 | Canola | nucleus | 30.41 | 17.99 |
| CDY48632 | Canola | cytosol, nucleus, plastid | 29.53 | 17.94 |
| CDY60870 | Canola | nucleus | 29.82 | 17.68 |
| CDX73304 | Canola | nucleus | 30.12 | 17.67 |
| CDY16427 | Canola | nucleus | 30.12 | 17.31 |
| CDY21216 | Canola | nucleus | 18.71 | 14.88 |
| CDY66161 | Canola | nucleus | 24.85 | 13.39 |
| CDY26922 | Canola | nucleus | 24.85 | 13.36 |
| CDX87118 | Canola | nucleus | 24.27 | 9.98 |
| CDX69392 | Canola | nucleus | 11.99 | 9.58 |
| CDX86969 | Canola | cytosol | 0.29 | 0.93 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078CYR8 | EnsemblPlants:CDX81124 | ProteinID:CDX81124 | ProteinID:CDX81124.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00134573001 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31989 |
| PANTHER:PTHR31989:SF14 | SUPFAM:SSF101941 | UniParc:UPI0004EF42BA | SEG:seg | : | : |
Description
BnaC03g03780D
Coordinates
chrLK031823:-:1835526..1838094
Molecular Weight (calculated)
38599.2 Da
IEP (calculated)
4.512
GRAVY (calculated)
-0.552
Length
342 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKTQLAPGF RFHPTDVELV RYYLKRKVLG KKLLVDAIVE LDIYKFEPSD LPDKSYIKSG DLKWHFFCPR EKKYATGVRA NRATECGYWK TTGKERAVLC
101: SDEVVGKIKT LVYHVGKSPR GERTDWVMHE YRLEDKVLAQ KNIPQDTYVL CVLFKKDGPG PRNGAQYGAP FNEEDWSDQE QHTDLPHLND AAHTPLSATP
201: LLDSNSTASL GPTLQAPTNN YDDIYSMLDR FVDEDECLPF CEPNNNEVMH DTCVPAPVFL EEGEDMFSEL LDLSIIHDNS MPRTPSYDLI ENSELYLELQ
301: DLTAPLAPPP AGNGSDSYLS NQGHFDLSTA NDDDPFGFSA FM
101: SDEVVGKIKT LVYHVGKSPR GERTDWVMHE YRLEDKVLAQ KNIPQDTYVL CVLFKKDGPG PRNGAQYGAP FNEEDWSDQE QHTDLPHLND AAHTPLSATP
201: LLDSNSTASL GPTLQAPTNN YDDIYSMLDR FVDEDECLPF CEPNNNEVMH DTCVPAPVFL EEGEDMFSEL LDLSIIHDNS MPRTPSYDLI ENSELYLELQ
301: DLTAPLAPPP AGNGSDSYLS NQGHFDLSTA NDDDPFGFSA FM
001: MGKTQLAPGF RFHPTDVELV RYYLKRKILG KKLLVDAIAE VDIYKFEPPD LPDMSFIRSG DLKWHFFCPR EKKYASGVRA NRATECGYWK TTGKERPVLC
101: NSEVVGKIKT LVYHFGKSPR GERTDWVMHE YRLDDKVLTQ MNVPQDTYVV CVLFKKDGPG PRNGAQYGAP FKEEDWSDEE VRTDVPSTSN PTNLLEPSKE
201: TTLALTAPDD SNKDCFGGMI SESCVSDFLP ATTNTTSELP HPSDAATTPM STAPLAETVQ TPNNDDLYSM LDLFDDDEEF LGFNNNEVRY DPGVSAPVCL
301: EEEGIFNGLP ELSSMPRTAS YDLVENSELY LELQDLTAPL NPQTGLQDLT APFNPQTGLQ DLTAPFNHQT GLQDHTAPFN PQTGLQDHTA PFNHQTGLQD
401: LTAPFNPQTG LQDLTAPFNP QTGLHDLTSP FNPQTGLQDL TAPLNPQTGN RNDPRSSSFL YNQGHFDFSG GNDDDPYGFS ASMRHRPKM
101: NSEVVGKIKT LVYHFGKSPR GERTDWVMHE YRLDDKVLTQ MNVPQDTYVV CVLFKKDGPG PRNGAQYGAP FKEEDWSDEE VRTDVPSTSN PTNLLEPSKE
201: TTLALTAPDD SNKDCFGGMI SESCVSDFLP ATTNTTSELP HPSDAATTPM STAPLAETVQ TPNNDDLYSM LDLFDDDEEF LGFNNNEVRY DPGVSAPVCL
301: EEEGIFNGLP ELSSMPRTAS YDLVENSELY LELQDLTAPL NPQTGLQDLT APFNPQTGLQ DLTAPFNHQT GLQDHTAPFN PQTGLQDHTA PFNHQTGLQD
401: LTAPFNPQTG LQDLTAPFNP QTGLHDLTSP FNPQTGLQDL TAPLNPQTGN RNDPRSSSFL YNQGHFDFSG GNDDDPYGFS ASMRHRPKM
Arabidopsis Description
NAC082NAC domain-containing protein 82 [Source:UniProtKB/Swiss-Prot;Acc:Q9FY82]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.