Factsheet for TraesCS2B01G616900.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G137200.2	Wheat	cytosol, nucleus, plastid	94.33	94.33
TraesCS2D01G567000.1	Wheat	cytosol	93.6	93.6
HORVU2Hr1G127550.1	Barley	nucleus	84.48	85.32
HORVU2Hr1G127510.1	Barley	nucleus	84.48	85.32
TraesCS6B01G033000.1	Wheat	nucleus	67.0	74.52
Solyc03g078120.2.1	Tomato	cytosol	18.97	51.33
Zm00001d002945_P010	Maize	cytosol	49.26	49.02
OQU82661	Sorghum	nucleus	47.78	47.9
TraesCS5B01G356100.1	Wheat	nucleus	20.69	38.71
KRH43549	Soybean	cytosol	28.33	35.6
CDX81124	Canola	nucleus	29.56	35.09
CDY44793	Canola	nucleus	30.05	34.86
TraesCS5B01G356000.1	Wheat	nucleus	22.17	34.75
CDY43785	Canola	nucleus	28.82	34.01
Bra024263.1-P	Field mustard	nucleus	28.82	34.01
CDX84485	Canola	nucleus	28.57	33.53
AT5G64060.1	Thale cress	nucleus	29.06	33.15
KRH59567	Soybean	cytosol, golgi, nucleus	25.62	32.81
TraesCS1B01G277300.1	Wheat	nucleus	33.74	31.71
Bra028640.1-P	Field mustard	nucleus	29.31	29.82
Bra006019.1-P	Field mustard	nucleus	26.35	29.48
CDX78356	Canola	nucleus	26.11	29.2
CDX69911	Canola	nucleus	31.03	28.77
CDY21575	Canola	nucleus	30.54	28.57
Bra009379.1-P	Field mustard	nucleus	31.03	27.75
KRH64046	Soybean	nucleus	32.51	27.33
KRH53893	Soybean	nucleus	32.76	26.44
AT5G09330.5	Thale cress	nucleus	30.54	25.36
PGSC0003DMT400073779	Potato	nucleus	33.0	24.72
VIT_04s0044g01220.t01	Wine grape	nucleus	32.76	23.75
TraesCS1B01G192200.1	Wheat	cytosol, nucleus, plastid	20.94	23.29
TraesCS3B01G208300.2	Wheat	cytosol	26.6	22.45
Solyc11g005920.1.1	Tomato	nucleus	34.48	20.38
TraesCS7B01G196900.1	Wheat	nucleus	31.53	19.91
TraesCS4B01G350600.1	Wheat	cytosol, nucleus, peroxisome	26.85	15.77
TraesCS6B01G451300.1	Wheat	nucleus	22.66	14.35
TraesCS7B01G187600.1	Wheat	nucleus	22.66	13.12
TraesCS5B01G271800.1	Wheat	cytosol, golgi, peroxisome	9.11	6.3

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR003441	InterPro:IPR036093	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005
PANTHER:PTHR31989	PANTHER:PTHR31989:SF46	SUPFAM:SSF101941	EnsemblPlantsGene:TraesCS2B01G616900	EnsemblPlants:TraesCS2B01G616900.1	SEG:seg

Description

No Description!

Coordinates

chr2B:+:793797057..793799019

Molecular Weight (calculated)

43280.4 Da

IEP (calculated)

5.050

GRAVY (calculated)

-0.494

Length

406 amino acids

Sequence
(BLAST)

001: MEMPPLPPGY RFHPTDVELT LYYLKRKLLG KKLLCNAVAE VDIYKHAPWD LPAKSSMPTG DLQWYFFCTR GRKYSVGQRA NRSTEGGYWK ATGKDRQVVY
101: ENRTVGMKRT LVFHAGKAPK GTRTDWVMYE YRLVQGEIPD AGVRLDDSVL CKVHKKSGPG PKIGEQYGAP FEEEEEELND KNGDTSCLSP SAPPAAPHSA
201: PGPSHGGMLN SAGQQLAAAS HSGGDSLSVS PANNSNTSGA RPDRASRLDV NWDSIHVEQL ADIIGRLSTN PAGQDGQSSD LTTANQDTEA VFDDSETIFE
301: ITDQVVPSSL CSSLCKQCDK CGVRLVDPLL EPAAGEPYME LNDLLSQCRA AGHAPDGSSS QAVVVSNGEG PALDLELRLG VESSESVGHS SGAVSAAASG
401: SGAPSS

Best Arabidopsis Sequence Match ( AT5G09330.1 )
(BLAST)

001: MGKTQLAPGF RFHPTDVELV RYYLKRKILG KKLLVDAIAE VDIYKFEPPD LPDMSFIRSG DLKWHFFCPR EKKYASGVRA NRATECGYWK TTGKERPVLC
101: NSEVVGKIKT LVYHFGKSPR GERTDWVMHE YRLDDKVLTQ MNVPQDTYVV CVLFKKDGPG PRNGAQYGAP FKEEDWSDEE VRTDVPSTSN PTNLLEPSKE
201: TTLALTAPDD SNKDCFGGMI SESCVSDFLP ATTNTTSELP HPSDAATTPM STAPLAETVQ TPNNDDLYSM LDLFDDDEEF LGFNNNEVRY DPGVSAPVCL
301: EEEGIFNGLP ELSSMPRTAS YDLVENSELY LELQDLTAPL NPQTGLQDLT APFNPQTGLQ DLTAPFNHQT GLQDHTAPFN PQTGLQDHTA PFNHQTGLQD
401: LTAPFNPQTG LQDLTAPFNP QTGLHDLTSP FNPQTGLQDL TAPLNPQTGN RNDPRSSSFL YNQGHFDFSG GNDDDPYGFS ASMRHRPKM

Arabidopsis Description

NAC082NAC domain-containing protein 82 [Source:UniProtKB/Swiss-Prot;Acc:Q9FY82]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.