Factsheet for Solyc11g005920.1.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400073779	Potato	nucleus	65.21	82.66
Solyc03g078120.2.1	Tomato	cytosol	17.18	78.67
HORVU0Hr1G000630.1	Barley	nucleus	18.63	48.12
GSMUA_Achr10P...	Banana	nucleus	17.76	47.47
TraesCS5A01G220900.1	Wheat	cytosol	15.57	45.92
VIT_04s0044g01220.t01	Wine grape	nucleus	34.35	42.14
CDX81124	Canola	nucleus	20.96	42.11
KRH43549	Soybean	cytosol	19.51	41.49
CDY44793	Canola	nucleus	20.67	40.57
Solyc03g098190.2.1	Tomato	nucleus	13.97	38.55
AT5G64060.1	Thale cress	nucleus	19.8	38.2
KRH59567	Soybean	cytosol, golgi, nucleus	17.61	38.17
HORVU2Hr1G045580.1	Barley	nucleus	19.36	38.0
HORVU7Hr1G033990.1	Barley	nucleus	19.36	38.0
Bra024263.1-P	Field mustard	nucleus	18.63	37.21
CDY43785	Canola	nucleus	18.63	37.21
CDX84485	Canola	nucleus	18.63	36.99
TraesCS1D01G266500.1	Wheat	nucleus	20.82	36.2
Bra028640.1-P	Field mustard	nucleus	20.82	35.84
Bra006019.1-P	Field mustard	nucleus	18.92	35.81
CDX78356	Canola	nucleus	18.92	35.81
HORVU1Hr1G065570.2	Barley	nucleus	22.42	35.73
OQU82661	Sorghum	nucleus	20.96	35.56
Zm00001d002945_P010	Maize	cytosol	21.11	35.54
CDX69911	Canola	nucleus	22.56	35.39
TraesCS6B01G033000.1	Wheat	nucleus	18.78	35.34
CDY21575	Canola	nucleus	22.27	35.25
TraesCS1A01G266300.2	Wheat	nucleus	21.98	35.2
TraesCS2D01G567000.1	Wheat	cytosol	20.52	34.73
TraesCS2B01G616900.1	Wheat	nucleus	20.38	34.48
GSMUA_Achr7P23330_001	Banana	nucleus	20.38	34.31
TraesCSU01G137200.2	Wheat	cytosol, nucleus, plastid	20.23	34.24
Bra009379.1-P	Field mustard	nucleus	22.56	34.14
TraesCS1B01G277300.1	Wheat	nucleus	21.4	34.03
TraesCS6A01G003800.1	Wheat	nucleus	18.63	33.95
KXG22035	Sorghum	nucleus	21.83	33.78
Zm00001d010227_P003	Maize	nucleus	21.54	33.26
GSMUA_Achr11P...	Banana	nucleus	21.11	33.1
HORVU2Hr1G127550.1	Barley	nucleus	19.36	33.08
HORVU2Hr1G127510.1	Barley	nucleus	19.36	33.08
Zm00001d038227_P001	Maize	nucleus	21.54	32.74
KRH64046	Soybean	nucleus	22.71	32.3
AT5G09330.5	Thale cress	nucleus	22.71	31.9
Os05t0426200-02	Rice	nucleus	20.52	31.4
Solyc05g055480.2.1	Tomato	nucleus	16.45	29.27
KRH53893	Soybean	nucleus	21.4	29.22
Solyc08g077110.2.1	Tomato	nucleus	13.83	27.94
Solyc06g061080.2.1	Tomato	nucleus	13.68	27.89
Solyc11g008010.1.1	Tomato	endoplasmic reticulum, plasma membrane	16.74	24.73
Solyc05g055470.2.1	Tomato	nucleus	18.05	22.79
Solyc11g008000.1.1	Tomato	nucleus	16.89	21.97
Solyc06g074170.2.1	Tomato	nucleus	11.79	19.8
Solyc04g072220.2.1	Tomato	cytosol, nucleus, plastid	17.03	19.53
Solyc02g036430.1.1	Tomato	nucleus	16.01	19.47
Solyc12g056790.1.1	Tomato	nucleus	16.3	18.98
Solyc11g068750.1.1	Tomato	nucleus, plasma membrane	11.94	18.14
Solyc06g073050.2.1	Tomato	nucleus	14.41	16.64
Solyc03g080090.2.1	Tomato	nucleus	13.97	15.26
Solyc02g081270.2.1	Tomato	nucleus	16.01	10.69

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003441
InterPro:IPR036093	UniProt:K4D4K5	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005
PANTHER:PTHR31989	PANTHER:PTHR31989:SF46	SUPFAM:SSF101941	EnsemblPlantsGene:Solyc11g005920.1	EnsemblPlants:Solyc11g005920.1.1	UniParc:UPI0002769A9E
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr11:+:743287..748004

Molecular Weight (calculated)

76254.5 Da

IEP (calculated)

4.635

GRAVY (calculated)

-0.375

Length

687 amino acids

Sequence
(BLAST)

001: MARLPPGFRF HPTDVELIMY YLKRKITGKK LHFEGITELN IYKFSPWDLP DKCCYKSKDL EWYFFCPRER KYASGARMNR ATDTGYWKTT GKDRPVTYCE
101: KIVGSVKTLV FHLGHPPRGK RTDWVIHEYK FEDKESIDAG FAQDSYVLCK VFQKSGPGPK NGAQYGAPFK EEDWEDDKIP AEPCTSDVFP APPGRTDKPS
201: GSNAIRMVDP RSTSDWTSSE QSPSPIQPSV QKLPLDEPDD EELPGEPNLS NVSSINWRPS DQLKAKPSNT FSALPILPEE QSCSVDTGLV NPGPGPSNAQ
301: MCTNEMALDD IDDEMIGLFA PFTEDTSLLS GGSEPNQKLD NFHQEVNAPP AACTDGNDIF DGLGDIEFWA GVGQLEPDLT ASGGANHSLN PVILPQEAPQ
401: DAAYMELNDL DIPLNHPAET IGTGQLVPGY FCTPYNSNNG MQQLCFGSNS LGIVQDFGEH HLPALPESYT QQVNHPDMAY NFLNNPNQGY NAATNFSVSS
501: YKQPEDRRLD TQNLERGVQQ QKFYLSIFAL CDGSFLLVKA EVTLGVDGCT NDALSVILGE QRKLYLSIFA FCGGPFILVK AEVTLGVDGC TNDALSVILG
601: NPSFTSTRVS NVDKADFSKK THEAFCFGFS LAFIRFSCVG MLWLNSLWEL YQFIVFKILL NQVQFNSSGT SFHLHFHLSY IANYAVL

Best Arabidopsis Sequence Match ( AT5G09330.1 )
(BLAST)

001: MGKTQLAPGF RFHPTDVELV RYYLKRKILG KKLLVDAIAE VDIYKFEPPD LPDMSFIRSG DLKWHFFCPR EKKYASGVRA NRATECGYWK TTGKERPVLC
101: NSEVVGKIKT LVYHFGKSPR GERTDWVMHE YRLDDKVLTQ MNVPQDTYVV CVLFKKDGPG PRNGAQYGAP FKEEDWSDEE VRTDVPSTSN PTNLLEPSKE
201: TTLALTAPDD SNKDCFGGMI SESCVSDFLP ATTNTTSELP HPSDAATTPM STAPLAETVQ TPNNDDLYSM LDLFDDDEEF LGFNNNEVRY DPGVSAPVCL
301: EEEGIFNGLP ELSSMPRTAS YDLVENSELY LELQDLTAPL NPQTGLQDLT APFNPQTGLQ DLTAPFNHQT GLQDHTAPFN PQTGLQDHTA PFNHQTGLQD
401: LTAPFNPQTG LQDLTAPFNP QTGLHDLTSP FNPQTGLQDL TAPLNPQTGN RNDPRSSSFL YNQGHFDFSG GNDDDPYGFS ASMRHRPKM

Arabidopsis Description

NAC082NAC domain-containing protein 82 [Source:UniProtKB/Swiss-Prot;Acc:Q9FY82]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.