Factsheet for Zm00001d010227_P003

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG22035	Sorghum	nucleus	84.49	84.68
Zm00001d038227_P001	Maize	nucleus	80.9	79.65
HORVU0Hr1G000630.1	Barley	nucleus	40.9	68.42
TraesCS5A01G220900.1	Wheat	cytosol	34.16	65.24
HORVU2Hr1G045580.1	Barley	nucleus	45.39	57.71
GSMUA_Achr10P...	Banana	nucleus	33.26	57.59
HORVU7Hr1G033990.1	Barley	nucleus	45.17	57.43
TraesCS1D01G266500.1	Wheat	nucleus	50.56	56.96
Os05t0426200-02	Rice	nucleus	56.85	56.35
Solyc03g078120.2.1	Tomato	cytosol	18.88	56.0
TraesCS1A01G266300.2	Wheat	nucleus	53.03	55.01
HORVU1Hr1G065570.2	Barley	nucleus	52.81	54.52
TraesCS1B01G277300.1	Wheat	nucleus	51.91	53.47
GSMUA_Achr7P23330_001	Banana	nucleus	41.12	44.85
Zm00001d021423_P001	Maize	nucleus	20.9	42.66
GSMUA_Achr11P...	Banana	nucleus	40.67	41.32
CDX81124	Canola	nucleus	31.46	40.94
KRH43549	Soybean	cytosol	29.66	40.87
Zm00001d021424_P001	Maize	nucleus	22.25	40.41
CDY44793	Canola	nucleus	30.34	38.57
KRH59567	Soybean	cytosol, golgi, nucleus	26.97	37.85
CDY43785	Canola	nucleus	28.76	37.21
Bra024263.1-P	Field mustard	nucleus	28.76	37.21
AT5G64060.1	Thale cress	nucleus	29.66	37.08
CDX84485	Canola	nucleus	28.54	36.71
Zm00001d002945_P010	Maize	cytosol	33.03	36.03
CDX78356	Canola	nucleus	27.87	34.16
Bra006019.1-P	Field mustard	nucleus	27.87	34.16
Bra028640.1-P	Field mustard	nucleus	30.11	33.58
CDX69911	Canola	nucleus	31.69	32.19
CDY21575	Canola	nucleus	30.79	31.57
AT5G09330.5	Thale cress	nucleus	34.61	31.49
Bra009379.1-P	Field mustard	nucleus	31.69	31.06
Zm00001d047050_P001	Maize	cytosol, nucleus, plastid	21.12	30.23
Zm00001d030023_P001	Maize	cytosol, nucleus, plastid	22.47	29.15
KRH64046	Soybean	nucleus	31.01	28.57
VIT_04s0044g01220.t01	Wine grape	nucleus	33.26	26.43
KRH53893	Soybean	nucleus	29.66	26.24
PGSC0003DMT400073779	Potato	nucleus	31.69	26.01
Zm00001d008308_P002	Maize	plastid	21.12	21.86
Solyc11g005920.1.1	Tomato	nucleus	33.26	21.54
Zm00001d040318_P001	Maize	cytosol, endoplasmic reticulum, nucleus	24.04	20.7
Zm00001d049913_P001	Maize	plastid	29.21	20.38
Zm00001d031898_P001	Maize	plastid	29.21	19.46
Zm00001d051879_P001	Maize	nucleus	27.64	18.72
Zm00001d027395_P009	Maize	nucleus	27.19	18.22
Zm00001d048493_P004	Maize	nucleus	27.42	17.76
Zm00001d049540_P002	Maize	cytosol	23.6	15.88
Zm00001d024543_P001	Maize	nucleus	23.15	15.51

Protein Annotations

EntrezGene:103635637	MapMan:15.5.17	Gene3D:3.30.310.150	ProteinID:AQK93661.1	ProteinID:AQK93662.1	ProteinID:AQK93663.1
ProteinID:AQK93664.1	ProteinID:AQK93665.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003441
InterPro:IPR036093	UniProt:K7UVJ1	EMBL:KJ727977	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365
PFscan:PS51005	PANTHER:PTHR31989	PANTHER:PTHR31989:SF61	SUPFAM:SSF101941	UniParc:UPI0002215EEF	EnsemblPlantsGene:Zm00001d010227
EnsemblPlants:Zm00001d010227_P003	EnsemblPlants:Zm00001d010227_T003	SEG:seg	:	:	:

Description

NAC-transcription factor 38Putative NAC domain transcription factor superfamily protein isoform 1%3B Putative NAC domain transcription factor superfamily protein isoform 2

Coordinates

chr8:+:104776612..104781353

Molecular Weight (calculated)

49515.7 Da

IEP (calculated)

4.366

GRAVY (calculated)

-0.530

Length

445 amino acids

Sequence
(BLAST)

001: MAQTSLPPGF RFHPTDVELV SYYLKRKIMG KKHIVDAIAE VDLYKFPPWD LCDKSSLRSK DLEWFFFCPR DKKYPNGSRT NRATPNGYWK TSGKDRIIML
101: NSRTVGMKKT LIFHEGKAPK GDRTDWVMYE YRMEDEDLVS AGFSKDAYVL CKIFKKSGLG PRIGEQYGAP FNEDEWDNAE VETSLFPLTC SEVNPTEGQR
201: AQPTVLAGAL LEPEPPLHNS SSTCAGEESS FGHATAEDLT FSHSVASSAI QDTPARMSGD GVVSVNNISN VANDMRSPRD CDEFLSELSR FMNDSPLRNT
301: PLGECSGLPP MSEAEAHAFE VNSFGLYNEL SELVGLGCAD NNLNTSNVET TDYLMLPPDR ELSANDYMEL NDLLAPDPSF PSEFSAQDNQ YMQHPLAQYN
401: GHYDLSGPSE PTMPSIFDVF PPNNGVLATD DPANYLDPAM QFPFS

Best Arabidopsis Sequence Match ( AT5G09330.1 )
(BLAST)

001: MGKTQLAPGF RFHPTDVELV RYYLKRKILG KKLLVDAIAE VDIYKFEPPD LPDMSFIRSG DLKWHFFCPR EKKYASGVRA NRATECGYWK TTGKERPVLC
101: NSEVVGKIKT LVYHFGKSPR GERTDWVMHE YRLDDKVLTQ MNVPQDTYVV CVLFKKDGPG PRNGAQYGAP FKEEDWSDEE VRTDVPSTSN PTNLLEPSKE
201: TTLALTAPDD SNKDCFGGMI SESCVSDFLP ATTNTTSELP HPSDAATTPM STAPLAETVQ TPNNDDLYSM LDLFDDDEEF LGFNNNEVRY DPGVSAPVCL
301: EEEGIFNGLP ELSSMPRTAS YDLVENSELY LELQDLTAPL NPQTGLQDLT APFNPQTGLQ DLTAPFNHQT GLQDHTAPFN PQTGLQDHTA PFNHQTGLQD
401: LTAPFNPQTG LQDLTAPFNP QTGLHDLTSP FNPQTGLQDL TAPLNPQTGN RNDPRSSSFL YNQGHFDFSG GNDDDPYGFS ASMRHRPKM

Arabidopsis Description

NAC082NAC domain-containing protein 82 [Source:UniProtKB/Swiss-Prot;Acc:Q9FY82]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.